Evidence map›Paper›PMID 30955889›Full record

ArticleCell2019

A Jasmonate Signaling Network Activates Root Stem Cells and Promotes Regeneration.

Wenkun Zhou, Jose L Lozano-Torres, Ikram Blilou, Xiaoyue Zhang, Qingzhe Zhai, Geert Smant, Chuanyou Li, Ben Scheres

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed
50.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 352 citations in OpenAlex.

  1. Cyclin' Through the Root: Developmental Control of Cell Cycle Progression in theAnnual review of cell and developmental biology · 2026
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  13. Cytokinin-supplemented medium drivesFrontiers in plant science · 2026
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  14. The LFR-SWI/SNF complex: A chromatin wrench safeguarding cellular quiescence in theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Review
  16. Auxin transport positions stem cells in the vascular cambium during normal development and regeneration.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Article
  19. Review
  20. Jasmonate primes plant responses to extracellular ATP.The Plant journal : for cell and molecular biology · 2025
    Article

105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Wenkun ZhouLaboratory of Plant Developmental Biology, Wageningen University and Research, 6708 PB Wageningen, the Netherlands; State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Jose L Lozano-TorresLaboratory of Nematology, Wageningen University and Research, 6708 PB Wageningen, the Netherlands.
Ikram BlilouLaboratory of Plant Developmental Biology, Wageningen University and Research, 6708 PB Wageningen, the Netherlands; KAUST, Thuwall 23955, Saudi Arabia.
Xiaoyue ZhangState Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Qingzhe ZhaiState Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Geert SmantLaboratory of Nematology, Wageningen University and Research, 6708 PB Wageningen, the Netherlands.
Chuanyou LiState Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, 100049 Beijing, China.
Ben ScheresLaboratory of Plant Developmental Biology, Wageningen University and Research, 6708 PB Wageningen, the Netherlands; Rijk Zwaan R&D, 4793 RS Fijnaart, the Netherlands. Electronic address: ben.scheres@wur.nl.
Chinese Academy of Sciences · CNGraduate School Experimental Plant Sciences · NLWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants are sessile and have to cope with environmentally induced damage through modification of growth and defense pathways. How tissue regeneration is triggered in such responses and whether this involves stem cell activation is an open question. The stress hormone jasmonate (JA) plays well-established roles in wounding and defense responses. JA also affects growth, which is hitherto interpreted as a trade-off between growth and defense. Here, we describe a molecular network triggered by wound-induced JA that promotes stem cell activation and regeneration. JA regulates organizer cell activity in the root stem cell niche through the RBR-SCR network and stress response protein ERF115. Moreover, JA-induced ERF109 transcription stimulates CYCD6;1 expression, functions upstream of ERF115, and promotes regeneration. Soil penetration and response to nematode herbivory induce and require this JA-mediated regeneration response. Therefore, the JA tissue damage response pathway induces stem cell activation and regeneration and activates growth after environmental stress.

Indexed as

ArabidopsisArabidopsis ProteinsCyclinsCyclopentanesGene Expression Regulation, PlantHerbivoryIndoleacetic AcidsOxylipinsPlant RootsRegenerationSignal TransductionStem CellsStress, PhysiologicalTranscription FactorsArabidopsis ProteinsCYCD6;1 protein, ArabidopsisCyclinsCyclopentanesERF115 protein, ArabidopsisIndoleacetic Acidsjasmonic acidOxylipinsTranscription FactorscyclinD6ERF109ERF115Jasmonateregenerationretinoblastoma relatedroot knot nematodeSCARECROWstem cellstissue damage

Identifiers

PMID30955889
OpenAlexW2932386949

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.