Evidence map›Paper›PMID 30954901›Full record

ArticleDNA repair2019

Ionizing radiation-induced growth in soft agar is associated with miR-21 upregulation in wild-type and DNA double strand break repair deficient cells.

Siyuan Tang, Bailong Liu, Min Liu, Zhentian Li, Jiaqi Liu, Hongyan Wang, Jian Wang, You-Take Oh, Liangfang Shen, Ya Wang

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. MicroRNA: a novel implication for damage and protection against ionizing radiation.Environmental science and pollution research international · 2021
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Siyuan TangDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States; Department of Oncology, Xiangya Hospital, Central South University, Changsha, China.
Bailong LiuDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States; Department of Oncology, The First Norman Bethune Hospital of Jilin University, Changchun, China.
Min LiuDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States; Department of Oncology, The First Norman Bethune Hospital of Jilin University, Changchun, China.
Zhentian LiDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States.
Jiaqi LiuDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States.
Hongyan WangDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States.
Jian WangDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States.
You-Take OhDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States.
Liangfang ShenDepartment of Oncology, Xiangya Hospital, Central South University, Changsha, China. Electronic address: slf1688@sina.com.
Ya WangDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA, United States. Electronic address: ywang94@emory.edu.
Emory University · USWinship Cancer InstituteXiangya Hospital Central South University · CN

Funding

Winship Cancer Institute Cancer Center Support GrantP30CA138292 · NCI · EMORY UNIVERSITY · PI Suresh S Ramalingam · 2009 to 2026
$47.5M
miR-21 signaling in tumor response to radiation treatmentR01CA186129 · NCI · EMORY UNIVERSITY · PI WANG, YA · 2014 to 2018
$1.6M
Mechanism for miR-21-modulated radioresistanceR21CA185882 · NCI · EMORY UNIVERSITY · PI WANG, YA · 2015 to 2016
$373k
NCI NIH HHS P30 CA138292NCI NIH HHS R01 CA186129NCI NIH HHS R21 CA185882
6 · The paper itself

Abstract

DNA double strand breaks (DSBs) are a severe threat to genome integrity and a potential cause of tumorigenesis, which is a multi-stage process and involves many factors including the mutation of oncogenes and tumor suppressors, some of which are transcribed microRNAs (miRNAs). Among more than 2000 known miRNAs, miR-21 is a unique onco-miRNA that is highly expressed in almost all types of human tumors and is associated with tumorigenesis through its multiple targets. However, it remains unclear whether there is any functional link between DSBs and miR-21 expression and, if so, does the link contribute to DSB-induced genomic instability/tumorigenesis. To address this question, we used DNA-PKcs-/- (deficient in non-homologous end-joining (NHEJ)) and Rad54-/- (deficient in homologous recombination repair (HRR)) mouse embryonic fibroblasts (MEFs) since NHEJ and HRR are the major pathways for DSB repair in mammalian cells. Our results indicate that levels of miR-21 are elevated in these DSB repair (DSBR) deficient cells, and ionizing radiation (IR) further increases these levels in both wild-type (WT) and DSBR-deficient cells. Interestingly, IR stimulated growth in soft agar and this effect was greatly reduced by blocking miR-21 expression in both WT and DSBR-deficient cells. Taken together, our results suggest that either IR or DSBR-deficient can lead to an upregulation of miR-21 levels and that miR-21 is associated with IR-induced cell growth in soft agar. These results may help our understanding of DSB-induced tumorigenesis and provide information that could facilitate the development of new strategies to prevent DSB-induced carcinogenesis.

Indexed as

AgarAnimalsAtaxia Telangiectasia Mutated ProteinsCarcinogenesisCell LineCell ProliferationDNA Breaks, Double-StrandedDNA RepairErbB ReceptorsMiceMicroRNAsUp-RegulationAgarAtaxia Telangiectasia Mutated ProteinsAtr protein, mouseEGFR protein, mouseErbB ReceptorsMicroRNAsMIRN21 microRNA, mouseDNA double strand breaksHomologous recombination repairIonizing radiationmiR-21Non-homologous end-joiningSoft agar

Identifiers

PMID30954901
PMCPMC9437867
OpenAlexW2923081261

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.