Evidence map›Paper›PMID 30952924›Full record

ArticleScientific reports2019

Genome-wide analysis in Hevea brasiliensis laticifers revealed species-specific post-transcriptional regulations of several redox-related genes.

Yi Zhang, Julie Leclercq, Shuangyang Wu, Enrique Ortega-Abboud, Stéphanie Pointet, Chaorong Tang, Songnian Hu, Pascal Montoro

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Yi ZhangCIRAD, UMR AGAP, F-34398, Montpellier, France.
Julie LeclercqCIRAD, UMR AGAP, F-34398, Montpellier, France.
Shuangyang WuCIRAD, UMR AGAP, F-34398, Montpellier, France.
Enrique Ortega-AbboudCIRAD, UMR AGAP, F-34398, Montpellier, France.
Stéphanie PointetCIRAD, UMR AGAP, F-34398, Montpellier, France.
Chaorong TangRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences (CATAS), Danzhou, 571737, China.
Songnian HuCAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, 100101, China.ORCID http://orcid.org/0000-0003-3966-3111
Pascal MontoroCIRAD, UMR AGAP, F-34398, Montpellier, France. pascal.montoro@cirad.fr.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRChinese Academy of Sciences · CNChinese Academy of Tropical Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNA-mediated post-transcriptional regulation has been reported on ROS production and scavenging systems. Although microRNAs first appeared highly conserved among plant species, several aspects of biogenesis, function and evolution of microRNAs were shown to differ. High throughput transcriptome and degradome analyses enable to identify small RNAs and their mRNA targets. A non-photosynthetic tissue particularly prone to redox reactions, laticifers from Hevea brasiliensis, revealed species-specific post-transcriptional regulations. This paper sets out to identify the 407 genes of the thirty main redox-related gene families harboured by the Hevea genome. There are 161 redox-related genes expressed in latex. Thirteen of these redox-related genes were targeted by 11 microRNAs. To our knowledge, this is the first report on a mutation in the miR398 binding site of the cytosolic CuZnSOD. A working model was proposed for transcriptional and post-transcriptional regulation with respect to the predicted subcellular localization of deduced proteins.

Indexed as

Gene Expression Regulation, PlantGene Expression ProfilingHeveaMicroRNAsOxidative StressPlant ProteinsReactive Oxygen SpeciesRNA, MessengerMicroRNAsPlant ProteinsReactive Oxygen SpeciesRNA, Messenger

Identifiers

PMID30952924
PMCPMC6450977
OpenAlexW2927221245

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.