Evidence map›Paper›PMID 30951522›Full record

ArticlePloS one2019

The mRNA export adaptor Yra1 contributes to DNA double-strand break repair through its C-box domain.

Valentina Infantino, Evelina Tutucci, Noël Yeh Martin, Audrey Zihlmann, Varinia Garcia-Molinero, Géraldine Silvano, Benoit Palancade, Françoise Stutz

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Valentina InfantinoDept. of Cell Biology, 30 Quai E. Ansermet, University of Geneva, Geneva, Switzerland.
Evelina TutucciDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY, United States of America.
Noël Yeh MartinCentre for Integrative Biology (CIBIO), University of Trento, Povo, Trento, Italy.
Audrey ZihlmannDept. of Cell Biology, 30 Quai E. Ansermet, University of Geneva, Geneva, Switzerland.
Varinia Garcia-MolineroDept. of Cell Biology, 30 Quai E. Ansermet, University of Geneva, Geneva, Switzerland.
Géraldine SilvanoDept. of Cell Biology, 30 Quai E. Ansermet, University of Geneva, Geneva, Switzerland.
Benoit PalancadeInstitut Jacques Monod, CNRS, UMR 7592, Univ Paris Diderot, Sorbonne Paris Cité, Paris, France.ORCID 0000-0002-3894-9735
Françoise StutzDept. of Cell Biology, 30 Quai E. Ansermet, University of Geneva, Geneva, Switzerland.ORCID 0000-0001-9718-355X
University of Geneva · CHAlbert Einstein College of Medicine · USCentre National de la Recherche Scientifique · FRUniversity of Trento · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yra1 is an mRNA export adaptor involved in mRNA biogenesis and export in S. cerevisiae. Yra1 overexpression was recently shown to promote accumulation of DNA:RNA hybrids favoring DNA double strand breaks (DSB), cell senescence and telomere shortening, via an unknown mechanism. Yra1 was also identified at an HO-induced DSB and Yra1 depletion causes defects in DSB repair. Previous work from our laboratory showed that Yra1 ubiquitination by Tom1 is important for mRNA export. Here, we found that Yra1 is also ubiquitinated by the SUMO-targeted ubiquitin ligases Slx5-Slx8 implicated in the interaction of irreparable DSB with nuclear pores. We further show that Yra1 binds an HO-induced irreparable DSB in a process dependent on resection. Importantly, a Yra1 mutant lacking the evolutionarily conserved C-box is not recruited to an HO-induced irreparable DSB and becomes lethal under DSB induction in a HO-cut reparable system. Together, the data provide evidence that Yra1 plays a crucial role in DSB repair via homologous recombination. While Yra1 sumoylation and/or ubiquitination are dispensable, the Yra1 C-box region is essential in this process.

Indexed as

DNA Breaks, Double-StrandedRecombinational DNA RepairDNA, FungalNuclear ProteinsProtein DomainsRNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitin-Protein LigasesDNA, FungalNuclear ProteinsRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSlx5 protein, S cerevisiaeSlx8 protein, S cerevisiaeUbiquitin-Protein LigasesYRA1 protein, S cerevisiae

Identifiers

PMID30951522
PMCPMC6450643
OpenAlexW2952564497

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.