Evidence map›Paper›PMID 30950832›Full record

ArticleActa crystallographica. Section F, Structural biology communications2019

Igni18, a novel metallo-hydrolase from the hyperthermophilic archaeon Ignicoccus hospitalis KIN4/I: cloning, expression, purification and X-ray analysis.

Stefanie Kobus, Pablo Perez-Garcia, Astrid Hoeppner, Nicholas Holzscheck, Filip Kovacic, Wolfgang R Streit, Karl Erich Jaeger, Jennifer Chow, Sander H J Smits

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 64% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Stefanie KobusCenter for Structural Studies (CSS), Heinrich Heine University Düsseldorf, Universitätsstrasse 1, 40225 Düsseldorf, Germany.
Pablo Perez-GarciaDepartment of Microbiology and Biotechnology, University of Hamburg, Ohnhorststrasse 18, 22609 Hamburg, Germany.ORCID 0000-0003-2248-3544
Astrid HoeppnerCenter for Structural Studies (CSS), Heinrich Heine University Düsseldorf, Universitätsstrasse 1, 40225 Düsseldorf, Germany.
Nicholas HolzscheckDepartment of Microbiology and Biotechnology, University of Hamburg, Ohnhorststrasse 18, 22609 Hamburg, Germany.
Filip KovacicInstitute of Molecular Enzyme Technology (IMET), Heinrich Heine University Düsseldorf, 52426 Jülich, Germany.ORCID 0000-0002-0313-427X
Wolfgang R StreitDepartment of Microbiology and Biotechnology, University of Hamburg, Ohnhorststrasse 18, 22609 Hamburg, Germany.ORCID 0000-0001-7617-7396
Karl Erich JaegerInstitute of Molecular Enzyme Technology (IMET), Heinrich Heine University Düsseldorf, 52426 Jülich, Germany.
Jennifer ChowDepartment of Microbiology and Biotechnology, University of Hamburg, Ohnhorststrasse 18, 22609 Hamburg, Germany.ORCID 0000-0002-7499-5325
Sander H J SmitsCenter for Structural Studies (CSS), Heinrich Heine University Düsseldorf, Universitätsstrasse 1, 40225 Düsseldorf, Germany.ORCID 0000-0003-0780-9251
Heinrich Heine University Düsseldorf · DEUniversität Hamburg · DEForschungszentrum Jülich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hyperthermophilic crenarchaeon Ignicoccus hospitalis KIN4/I possesses at least 35 putative genes encoding enzymes that belong to the α/β-hydrolase superfamily. One of those genes, the metallo-hydrolase-encoding igni18, was cloned and heterologously expressed in Pichia pastoris. The enzyme produced was purified in its catalytically active form. The recombinant enzyme was successfully crystallized and the crystal diffracted to a resolution of 2.3 Å. The crystal belonged to space group R32, with unit-cell parameters a = b = 67.42, c = 253.77 Å, α = β = 90.0, γ = 120.0°. It is suggested that it contains one monomer of Igni18 within the asymmetric unit.

Indexed as

Cloning, MolecularGene ExpressionAmino Acid SequenceCrystallizationCrystallography, X-RayDesulfurococcaceaeHydrolasesMetalsHydrolasesMetalsIgnicoccus hospitalismetallo-β-lactamasesα/β-hydrolases

Identifiers

PMID30950832
PMCPMC6450517
OpenAlexW2925724716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.