Evidence map›Paper›PMID 30950823›Full record

ArticleActa crystallographica. Section F, Structural biology communications2019

Crystal structure of protein tyrosine phosphatase-2 from Cydia pomonella granulovirus.

Guangmei Huang, Michael R Oliver, Jeremy R Keown, David C Goldstone, Peter Metcalf

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 98% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Guangmei HuangSchool of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand.
Michael R OliverSchool of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand.
Jeremy R KeownSchool of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand.ORCID 0000-0003-0159-9257
David C GoldstoneSchool of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand.ORCID 0000-0003-0069-9408
Peter MetcalfSchool of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand.ORCID 0000-0002-1550-0783
University of Auckland · NZ

Funding

Marsden Fund UOA221
6 · The paper itself

Abstract

Many viral genomes encode kinase and phosphatase enzymes to manipulate pathways that are controlled by phosphorylation events. The majority of viral phosphatase genes occur in the Baculoviridae and Poxviridae families of large DNA viruses. The corresponding protein sequences belong to four major homology groups, and structures are currently available for only two of these. Here, the first structure from the third group, the protein tyrosine phosphatase-2 (PTP-2) class of viral phosphatases, is described. It is shown that Cydia pomonella granulovirus PTP-2 has the same general fold and active-site architecture as described previously for other phosphatases, in the absence of significant sequence homology. Additionally, it has a novel C-terminal extension in an area corresponding to the interface of dimeric poxvirus phosphatases belonging to the Tyr-Ser protein phosphatase homology group.

Indexed as

Amino Acid SequenceCatalytic DomainCrystallography, X-RayGranulovirusProtein KinasesProtein Phosphatase 2Protein Structure, SecondarySequence AlignmentProtein KinasesProtein Phosphatase 2Cydia pomonella granulovirusphosphatasesprotein tyrosine phosphatase-2PTP-2

Identifiers

PMID30950823
PMCPMC6450516
OpenAlexW2921656473

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.