Evidence map›Paper›PMID 30950400›Full record

ArticleActa crystallographica. Section D, Structural biology2019

Engineered variants provide new insight into the structural properties important for activity of the highly dynamic, trimeric protein disulfide isomerase ScsC from Proteus mirabilis.

Emily J Furlong, Fabian Kurth, Lakshmanane Premkumar, Andrew E Whitten, Jennifer L Martin

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Emily J FurlongInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia.
Fabian KurthInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia.
Lakshmanane PremkumarInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia.
Andrew E WhittenAustralian Nuclear Science and Technology Organisation, Lucas Heights, NSW 2234, Australia.ORCID 0000-0001-8856-3120
Jennifer L MartinGriffith Institute for Drug Discovery, Griffith University, Nathan, QLD 4111, Australia.
Griffith University · AUThe University of Queensland · AUAustralian Nuclear Science and Technology Organisation · AU

Funding

Australian Research Council FL0992138National Health and Medical Research Council 1099151
6 · The paper itself

Abstract

Suppressor of copper sensitivity protein C from Proteus mirabilis (PmScsC) is a homotrimeric disulfide isomerase that plays a role in copper tolerance, which is a key virulence trait of this uropathogen. Each protomer of the enzyme has an N-terminal trimerization stem (59 residues) containing a flexible linker (11 residues) connected to a thioredoxin-fold-containing catalytic domain (163 residues). Here, two PmScsC variants, PmScsCΔN and PmScsCΔLinker, are characterized. PmScsCΔN is an N-terminally truncated form of the protomer with two helices of the trimerization stem removed, generating a protein with dithiol oxidase rather than disulfide isomerase activity. The crystal structure of PmScsCΔN reported here reveals, as expected, a monomer that is structurally similar to the catalytic domain of native PmScsC. The second variant, PmScsCΔLinker, was designed to remove the 11-amino-acid linker, and it is shown that it generates a protein that has neither disulfide isomerase nor dithiol oxidase activity. The crystal structure of PmScsCΔLinker reveals a trimeric arrangement, with the catalytic domains packed together very closely. Small-angle X-ray scattering analysis found that native PmScsC is predominantly trimeric in solution even at low concentrations, whereas PmScsCΔLinker exists as an equilibrium between monomeric, dimeric and trimeric states, with the monomeric form dominating at low concentrations. These findings increase the understanding of disulfide isomerase activity, showing how (i) oligomerization, (ii) the spacing between and (iii) the dynamic motion of catalytic domains in PmScsC all contribute to its native function.

Indexed as

Bacterial ProteinsCatalytic DomainModels, MolecularProtein Disulfide-IsomerasesProtein MultimerizationProtein Structure, QuaternaryProteus mirabilisScattering, Small AngleBacterial ProteinsProtein Disulfide-Isomerasescopper tolerancedisulfide isomerasesProteus mirabilisScsCsuppressor of copper sensitivity protein C

Identifiers

PMID30950400
PMCPMC6450059
OpenAlexW2918004980

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.