Evidence map›Paper›PMID 30949805›Full record

ArticleCurrent microbiology2019

The Genome Sequence of a Novel Cyanophage S-B64 from the Yellow Sea, China.

Siyuan You, Min Wang, Yong Jiang, Tong Jiang, Yundan Liu, Xinxin Liu, Qingwei Yang, Hongbing Shao

Abstract read
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In one paragraph

Article in Current microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Siyuan YouCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China.
Min WangCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China. mingwang@ouc.edu.cn.
Yong JiangCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China. yongjiang@ouc.edu.cn.ORCID http://orcid.org/0000-0001-6055-488X
Tong JiangCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China.
Yundan LiuCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China.
Xinxin LiuCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China.
Qingwei YangCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China.
Hongbing ShaoCollege of Marine Life Sciences, Ocean University of China, Qingdao, 266003, China.

Funding

Fundamental Research Funds for the Central University of Ocean University of China 201562018Fundamental Research Funds for the Central University of Ocean University of China 201762017Fundamental Research Funds for the Central University of Ocean University of China 201812002the Marine Scientific and Technological Innovation Project Financially Supported by Pilot National Laboratory for Marine Science and Technology (Qingdao) 2016ASKJ14the Marine Scientific and Technological Innovation Project Financially Supported by Pilot National Laboratory for Marine Science and Technology (Qingdao) 2018SDKJ0406-6the National Natural Science Foundation of China 41076088the National Natural Science Foundation of China 41676178the National Natural Science Foundation of China No. 31500339
6 · The paper itself

Abstract

A novel cyanophage, S-B64, which can infect marine Synechococcus WH8102, was isolated from the coastal waters of the Yellow Sea using the liquid serial dilution method. Morphological study by transmission electron microscopy revealed that the cyanophage belongs to Podovirus. It's genome, which was completely sequenced, contains a 151,867 bp DNA molecule with a G+C content of 41.78% and 186 potential open reading frames. The functions of the genes include cyanophage structure, cyanophage packaging, DNA replication and regulation. After primary characterization, it was found that the latent period is about 3 h, and it lysed after 8 h, the burst size is about 23 virions per cell. This information will provide an important benchmark for further research on the interaction between cyanophages and their hosts.

Indexed as

Genome, ViralBacteriophagesBase CompositionChinaGenes, ViralMicroscopy, Electron, TransmissionPodoviridaeSeawaterSequence Analysis, DNASynechococcusVirion

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.