ArticleBiological research2019
Identification and characterization of CircRNAs involved in the regulation of wheat root length.
Article in Biological research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 45 citations in OpenAlex.
- Elucidating circRNA-miRNA-mRNA competing endogenous regulatory RNA network during leaf rust pathogenesis in wheat (Triticum aestivum L.).Functional & integrative genomics · 2025Article
- Review
- Identification and Analysis of lncRNA and circRNA Related to Wheat Grain Development.International journal of molecular sciences · 2024Article
- Identification and Characterisation of the CircRNAs Involved in the Regulation of Leaf Colour inBiology · 2024Article
- The Emerging Role of Non-Coding RNAs (ncRNAs) in Plant Growth, Development, and Stress Response Signaling.Non-coding RNA · 2024Review
- Defense Regulatory Network Associated with circRNA in Rice in Response to Brown Planthopper Infestation.Plants (Basel, Switzerland) · 2024Article
- Whole-transcriptome profiling and identification of cold tolerance-related ceRNA networks inFrontiers in plant science · 2024Article
- Unraveling the modulatory manner and function of circRNAs in the Asian honey bee larval guts.Frontiers in cell and developmental biology · 2024Article
- Circular RNAs modulate the floral fate acquisition in soybean shoot apical meristem.BMC plant biology · 2023Article
- Identification and characterization of CircRNA-associated CeRNA networks in moso bamboo under nitrogen stress.BMC plant biology · 2023Article
- Evolutionary Landscape of Tea Circular RNAs and Its Contribution to Chilling Tolerance of Tea Plant.International journal of molecular sciences · 2023Article
- Identification, biogenesis, function, and mechanism of action of circular RNAs in plants.Plant communications · 2023Review
- Identification and Characterization of Circular RNAs Involved in the Flower Development and Senescence of Rhododendron delavayi FranchInternational journal of molecular sciences · 2022Article
- Transcriptomic analysis reveals the contribution ofFrontiers in plant science · 2022Article
- Identification and Characterization of Novel circRNAs Involved in Muscle Growth of Blunt Snout Bream (International journal of molecular sciences · 2021Article
- Systematic identification and characterization of circular RNAs involved in flag leaf senescence of rice.Planta · 2021Article
- NGS Methodologies and Computational Algorithms for the Prediction and Analysis of Plant Circular RNAs.Methods in molecular biology (Clifton, N.J.) · 2021Article
- Signaling Responses to N Starvation: Focusing on Wheat and Filling the Putative Gaps With Findings Obtained in Other Plants. A Review.Frontiers in plant science · 2021Review
- Identification and Characterization of circRNAs Responsive to Methyl Jasmonate inInternational journal of molecular sciences · 2020Article
- CirRNAPL: A web server for the identification of circRNA based on extreme learning machine.Computational and structural biotechnology journal · 2020Article
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
Abstract
backgroundRecent studies indicate that circular RNAs (circRNAs) may play important roles in the regulation of plant growth and development. Plant roots are the main organs of nutrient and water uptake. However, whether circRNAs involved in the regulation of plant root growth remains to be elucidated.
methodsLH9, XN979 and YN29 are three Chinese wheat varieties with contrasting root lengths. Here, the root circRNA expression profiles of LH9, XN979 and YN29 were examined by using high-throughput sequencing technology.
resultsThirty-three and twenty-two differentially expressed circRNAs (DECs) were identified in the YN29-LH9 comparison and YN29-XN979 comparison, respectively. Among them, ten DECs coexisted in both comparisons. As the roots of both LH9 and XN979 were significantly larger and deeper than YN29, the ten DECs coexisting in the two comparisons were highly likely to be involved in the regulation of wheat root length. Moreover, three of the ten DECs have potential miRNA binding sites. Real-time PCR analysis showed that the expression levels of the potential binding miRNAs exhibited significant differences between the long root plants and the short root plants.
conclusionsThe expression levels of some circRNAs exhibited significant differences in wheat varieties with contrasting root phenotypes. Ten DECs involved in the regulation of wheat root length were successfully identified in which three of them have potential miRNAs binding sites. The expression levels of putative circRNA-binding miRNAs were correlated with their corresponding circRNAs. Our results provide new clues for studying the potential roles of circRNAs in the regulation of wheat root length.
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