Evidence map›Paper›PMID 30946568›Full record

ArticleBiochemistry2019

Probing the Cys-Tyr Cofactor Biogenesis in Cysteine Dioxygenase by the Genetic Incorporation of Fluorotyrosine.

Jiasong Li, Teruaki Koto, Ian Davis, Aimin Liu

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 44 citations in OpenAlex.

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  9. Engineering enzyme activity using an expanded amino acid alphabet.Protein engineering, design & selection : PEDS · 2023
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  13. Biosynthesis of sulfonamide and sulfamate antibiotics in actinomycete.Journal of industrial microbiology & biotechnology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jiasong LiDepartment of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States.
Teruaki KotoDepartment of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States.
Ian DavisDepartment of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States.ORCID 0000-0002-1566-4972
Aimin LiuDepartment of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States.ORCID 0000-0002-4182-8176
The University of Texas at San Antonio · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
NF-kappaB Regulation by Human PirinR01GM107529 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI LI, JIAN-DONG, LIU, AIMIN · 2014 to 2017
$1.0M
NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM107529
6 · The paper itself

Abstract

Cysteine dioxygenase (CDO) is a nonheme iron enzyme that adds two oxygen atoms from dioxygen to the sulfur atom of l-cysteine. Adjacent to the iron site of mammalian CDO, there is a post-translationally generated Cys-Tyr cofactor, whose presence substantially enhances the oxygenase activity. The formation of the Cys-Tyr cofactor in CDO is an autocatalytic process, and it is challenging to study by traditional techniques because the cross-linking reaction is a side, uncoupled, single-turnover oxidation buried among multiple turnovers of l-cysteine oxygenation. Here, we take advantage of our recent success in obtaining a purely uncross-linked human CDO due to site-specific incorporation of 3,5-difluoro-l-tyrosine (F

Indexed as

Protein ConformationCatalytic DomainCross-Linking ReagentsCrystallography, X-RayCysteineCysteine DioxygenaseDipeptidesElectron Spin Resonance SpectroscopyHumansModels, MolecularNitric OxideOxidation-ReductionOxygenProtein BindingTyrosine3,5-difluorotyrosineCross-Linking ReagentsCysteineCysteine DioxygenasecysteinyltyrosineDipeptidesNitric OxideOxygenTyrosine

Identifiers

PMID30946568
PMCPMC6658890
OpenAlexW2930951846

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.