Article3 Biotech2019
Comparative genomics of 40 edible and medicinal mushrooms provide an insight into the evolution of lignocellulose decomposition mechanisms.
Article in 3 Biotech, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
10 citing papers in PubMed, 14 citations in OpenAlex.
- Impact of Ginger Straw on Cultivation and Quality ofFoods (Basel, Switzerland) · 2026Article
- Article
- A Combination of Transcriptome and Enzyme Activity Analysis Unveils Key Genes and Patterns of Corncob Lignocellulose Degradation byJournal of fungi (Basel, Switzerland) · 2024Article
- Metaprofiling of the Bacterial Community in Colonized Compost Extracts byJournal of fungi (Basel, Switzerland) · 2022Article
- Impact of Cultivation Substrate and Microbial Community on Improving Mushroom Productivity: A Review.Biology · 2022Review
- Sexual Crossing, Chromosome-Level Genome Sequences, and Comparative Genomic Analyses for the Medicinal MushroomMicrobiology spectrum · 2022Article
- Challenges and opportunities in producing high-quality edible mushrooms from lignocellulosic biomass in a small scale.Applied microbiology and biotechnology · 2022Review
- Genomic Analysis Enlightens Agaricales Lifestyle Evolution and Increasing Peroxidase Diversity.Molecular biology and evolution · 2021Article
- Evaluation of Laccase Activities by Three Newly Isolated Fungal Species in Submerged Fermentation With Single or Mixed Lignocellulosic Wastes.Frontiers in microbiology · 2021Article
- The White-Rot BasidiomyceteFrontiers in bioengineering and biotechnology · 2019Article
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Diversity comparison and phylogenetic analyses of carbohydrate-active enzymes (CAZymes), auxiliary activities (AAs) and cytochromes P450 among 40 fungi, which are based on different nutritional pathways, help clarify and explain their divergence and improvement of various life-styles. Molecular clock analyses allow us to understand the evolutionary and developmental rules in decomposition gene families. Our results suggested that fungi in different ecological types acquired an obvious preference on specific decomposing gene families during evolutionary selection. White rot and litter saprotrophic fungi possessed more complete types of varied degradation gene families and were superior in quantities. With evolution and development of lignocellulose decomposition mechanism, certain families (like CBM1, GH6, GH7, GH10, and CYP53) disappeared in brown rot fungi and symbiotic fungi. In addition, the earlier time of phylogenetic divergence determined the more integrated and larger decomposition families. And various gains and losses in gene quantity of varied decomposition families led in particularly phylogenetic clades or nodes, then accelerated in forming varied ecotypes of species.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.