Evidence map›Paper›PMID 30943268›Full record

ArticlePLoS pathogens2019

The requirement for co-germinants during Clostridium difficile spore germination is influenced by mutations in yabG and cspA.

Ritu Shrestha, Alicia M Cochran, Joseph A Sorg

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Clostridioides difficile pathogenesis and control.Nature reviews. Microbiology · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Phenotypic analysis of variousApplied and environmental microbiology · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Phenotypic analysis of variousbioRxiv : the preprint server for biology · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. The small acid-soluble proteins ofbioRxiv : the preprint server for biology · 2024
    Article
  17. The impact of YabG mutations onbioRxiv : the preprint server for biology · 2024
    Article
  18. Response to comments on the tolerance toMicrobiology (Reading, England) · 2024
    Article
  19. Clostridioides difficile Sporulation.Advances in experimental medicine and biology · 2024
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ritu ShresthaDepartment of Biology, Texas A&M University, College Station, United States of America.
Alicia M CochranDepartment of Biology, Texas A&M University, College Station, United States of America.
Joseph A SorgDepartment of Biology, Texas A&M University, College Station, United States of America.ORCID 0000-0001-7822-2656
Texas A&M University · US

Funding

Decoding Antibiotic-induced Susceptibility to Clostridium difficile InfectionU01AI124290 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BRITTON, ROBERT A, GAREY, KEVIN W · 2016 to 2020
$7.9M
Mechanisms of Clostridium difficile spore germinationR01AI116895 · NIAID · TEXAS A&M UNIVERSITY · PI SORG, JOE · 2015 to 2024
$3.9M
NIAID NIH HHS R01 AI116895NIAID NIH HHS U01 AI124290
6 · The paper itself

Abstract

Clostridium difficile spore germination is critical for the transmission of disease. C. difficile spores germinate in response to cholic acid derivatives, such as taurocholate (TA), and amino acids, such as glycine or alanine. Although the receptor with which bile acids are recognized (germinant receptor) is known, the amino acid co-germinant receptor has remained elusive. Here, we used EMS mutagenesis to generate mutants with altered requirements for the amino acid co-germinant, similar to the strategy we used previously to identify the bile acid germinant receptor, CspC. Surprisingly, we identified strains that do not require co-germinants, and the mutant spores germinated in response to TA alone. Upon sequencing these mutants, we identified different mutations in yabG. In C. difficile, yabG expression is required for the processing of key germination components to their mature forms (e.g., CspBA to CspB and CspA). A defined yabG mutant exacerbated the EMS mutant phenotype. Building upon this work, we found that small deletions in cspA resulted in spores that germinated in the presence of TA alone without the requirement of a co-germinant. cspA encodes a pseudoprotease that was previously shown to be important for incorporation of the CspC germinant receptor. Herein, our study builds upon the role of CspA during C. difficile spore germination by providing evidence that CspA is important for recognition of co-germinants during C. difficile spore germination. Our work suggests that two pseudoproteases (CspC and CspA) likely function as the C. difficile germinant receptors.

Indexed as

Gene Expression Regulation, BacterialMutationBacterial ProteinsBile Acids and SaltsCarrier ProteinsClostridioides difficilePhenotypeSpores, BacterialBacterial ProteinsBile Acids and SaltsCarrier ProteinsCspA protein, Clostridium

Identifiers

PMID30943268
PMCPMC6464247
OpenAlexW2930303570

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.