Evidence map›Paper›PMID 30941903›Full record

ArticleCancer medicine2019

Tumor mutation burden and recurrent tumors in hereditary lung cancer.

Yi-Chiung Hsu, Ya-Hsuan Chang, Gee-Chen Chang, Bing-Ching Ho, Shin-Sheng Yuan, Yu-Cheng Li, Jhih-Wun Zeng, Sung-Liang Yu, Ker-Chau Li, Pan-Chyr Yang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

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  11. Identifying GNG4 might play an important role in colorectal cancer TMB.Cancer biomarkers : section A of Disease markers · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Yi-Chiung HsuDepartment of Biomedical Sciences and Engineering, National Central University, Taoyuan, Taiwan.ORCID 0000-0002-8712-8714
Ya-Hsuan ChangDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Gee-Chen ChangDivision of Chest Medicine, Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan.
Bing-Ching HoDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Shin-Sheng YuanInstitute of Statistical Science, Academia Sinica, Taipei, Taiwan.
Yu-Cheng LiInstitute of Statistical Science, Academia Sinica, Taipei, Taiwan.
Jhih-Wun ZengInstitute of Statistical Science, Academia Sinica, Taipei, Taiwan.
Sung-Liang YuDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Ker-Chau LiInstitute of Statistical Science, Academia Sinica, Taipei, Taiwan.
Pan-Chyr YangCollege of Medicine, National Taiwan University, Taipei, Taiwan.
Hsuan-Yu ChenInstitute of Statistical Science, Academia Sinica, Taipei, Taiwan.ORCID 0000-0003-0358-9132
Institute of Statistical Science, Academia Sinica · TWNational Taiwan University · TWNational Central University · TWTaichung Veterans General Hospital · TWUniversity of California, Los Angeles · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lung cancer is the leading cause of cancer death worldwide and cancer relapse accounts for the majority of cancer mortality. The mechanism is still unknown, especially in hereditary lung cancer without known actionable mutations. To identify genetic alternations involved in hereditary lung cancer and relapse is urgently needed. We collected genetic materials from a unique hereditary lung cancer patient's blood, first cancer tissue (T1), adjacent normal tissue (N1), relapse cancer tissue (T2), and adjacent normal tissue (N2) for whole genome sequencing. We identified specific mutations in T1 and T2, and attributed them to tumorigenesis and recurrence. These tumor specific variants were enriched in antigen presentation pathway. In addition, a lung adenocarcinoma cohort from the TCGA dataset was used to confirm our findings. Patients with high mutation burdens in tumor specific genes had decreased relapse-free survival (P = 0.017, n = 186). Our study may provide important insight for designing immunotherapeutic treatment for hereditary lung cancer.

Indexed as

Adenocarcinoma of LungAdultAgedAntigen PresentationBiomarkers, TumorCohort StudiesFemaleGene Regulatory NetworksGenetic Predisposition to DiseaseGerm-Line MutationHumansLung NeoplasmsMaleMiddle AgedMutation, MissenseNeoplasm Recurrence, LocalBiomarkers, Tumorhereditary lung cancermutation loadnonsmokerrecurrencewhole genome sequencing

Identifiers

PMID30941903
PMCPMC6536970
OpenAlexW2932643692

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.