Evidence map›Paper›PMID 30941640›Full record

ArticleMarine biotechnology (New York, N.Y.)2019

Comparative Transcriptome Analysis Reveals Differentially Expressed Genes and Signaling Pathways Between Male and Female Red-Tail Catfish (Mystus wyckioides).

Jun-Jie Wu, Yu-Lin Zhou, Zhong-Wei Wang, Guang-Hua Li, Fang-Peng Jin, Li-Li Cui, Hai-Tao Gao, Xin-Ping Li, Li Zhou, Jian-Fang Gui

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Pomc Plays an Important Role in Sexual Size Dimorphism in Tilapia.Marine biotechnology (New York, N.Y.) · 2021
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jun-Jie WuYunnan Institute of Fishery Sciences Research, Kunming, 650111, China.
Yu-Lin ZhouState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, University of the Chinese Academy of Sciences, Wuhan, 430072, China.
Zhong-Wei WangState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, University of the Chinese Academy of Sciences, Wuhan, 430072, China. wzw0909@ihb.ac.cn.
Guang-Hua LiYunnan Institute of Fishery Sciences Research, Kunming, 650111, China.
Fang-Peng JinYunnan Institute of Fishery Sciences Research, Kunming, 650111, China.
Li-Li CuiYunnan Institute of Fishery Sciences Research, Kunming, 650111, China.
Hai-Tao GaoYunnan Institute of Fishery Sciences Research, Kunming, 650111, China.
Xin-Ping LiXishuangbanna Native Fish Research and Breeding Center, Xishuangbanna, 666100, China.
Li ZhouState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, University of the Chinese Academy of Sciences, Wuhan, 430072, China.
Jian-Fang GuiState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, University of the Chinese Academy of Sciences, Wuhan, 430072, China.
State Key Laboratory of Freshwater Ecology and BiotechnologyChinese Academy of Sciences · CNGuangxi Academy of Fishery Sciences · CNInstitute of Hydrobiology · CN

Funding

Autonomous Project of the State Key Laboratory of Freshwater Ecology and Biotechnology 2016FBZ01Earmarked Fund for Modern Agro-industry Technology Research System NYCYTX-49Key Program of Frontier Sciences of the Chinese Academy of Sciences QYZDY-SSW-SMC025Yunnan Academician Workstation Y73Z04-1-301
6 · The paper itself

Abstract

Sexual dimorphism is widespread in fish species. The red-tail catfish (Mystus wyckioides) is a commercially important catfish in the lower reaches of the Lancang River and the Mekong basin, and it shows a growth advantage in males. Here, RNA-seq was for the first time used to explore the gene expression difference between the sexes in the hypothalamus and pituitary of red-tail catfish, respectively. In the hypothalamus, 5732 and 271 unigenes have significantly higher and lower expressions, respectively, in males compared with females. KEGG analysis showed that 212 DEGs were annotated to 216 signaling pathways, and enrichment analysis suggested different levels of cAMP and glutamatergic synapse signaling between male and female hypothalami and some of the DEGs appear involved in gonad development and growth. In the pituitary, we found only 19 differentially expressed unigenes, which were annotated to 32 signaling pathways, most of which play important roles in gonad development.

Indexed as

Gene Expression Regulation, DevelopmentalSex CharacteristicsTranscriptomeAnimalsCatfishesCyclic AMPFemaleFish ProteinsGene Expression ProfilingGene OntologyGlutamic AcidHypothalamusMaleMolecular Sequence AnnotationOvaryPituitary GlandCyclic AMPFish ProteinsGlutamic AcidGonad developmentGrowthHypothalamusPituitaryTranscriptome

Identifiers

PMID30941640
OpenAlexW2935473914

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.