Evidence map›Paper›PMID 30940835›Full record

ArticleScientific reports2019

Synthetic standard aided quantification and structural characterization of amyloid-beta glycopeptides enriched from cerebrospinal fluid of Alzheimer's disease patients.

Jonas Nilsson, Gunnar Brinkmalm, Sherif Ramadan, Lisa Gilborne, Fredrik Noborn, Kaj Blennow, Anders Wallin, Johan Svensson, Mohamed A Abo-Riya, Xuefei Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Peptidomic Approaches and Observations in Neurodegenerative Diseases.International journal of molecular sciences · 2022
    Review
  6. Article
  7. TyrosineACS chemical neuroscience · 2021
    Article
  8. Article
  9. Article
  10. Towards structure-focused glycoproteomics.Biochemical Society transactions · 2021
    Review
  11. Review
  12. Review
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Jonas NilssonLaboratory of Clinical Chemistry, Sahlgrenska University Hospital, Gothenburg, Sweden.ORCID http://orcid.org/0000-0001-5263-2454
Gunnar BrinkmalmDepartment of Psychiatry and Neurochemistry, Institute of Neuroscience and Physiology, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.ORCID http://orcid.org/0000-0001-6958-2393
Sherif RamadanDepartments of Chemistry and Biomedical Engineering, Institute for Quantitative Health, Science and Engineering, Michigan State University, East Lansing, MI, USA.ORCID http://orcid.org/0000-0002-8639-4105
Lisa GilborneLaboratory of Clinical Chemistry, Sahlgrenska University Hospital, Gothenburg, Sweden.
Fredrik NobornLaboratory of Clinical Chemistry, Sahlgrenska University Hospital, Gothenburg, Sweden.
Kaj BlennowDepartment of Psychiatry and Neurochemistry, Institute of Neuroscience and Physiology, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Anders WallinDepartment of Psychiatry and Neurochemistry, Institute of Neuroscience and Physiology, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Johan SvenssonDepartment of Internal Medicine, Institute of Medicine Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Mohamed A Abo-RiyaChemistry Department, Faculty of Science, Benha University, Benha, Qaliobiya, 13518, Egypt.
Xuefei HuangDepartments of Chemistry and Biomedical Engineering, Institute for Quantitative Health, Science and Engineering, Michigan State University, East Lansing, MI, USA. xuefei@chemistry.msu.edu.
Göran LarsonLaboratory of Clinical Chemistry, Sahlgrenska University Hospital, Gothenburg, Sweden. goran.larson@clinchem.gu.se.ORCID http://orcid.org/0000-0002-2616-0366
Sahlgrenska University Hospital · SEUniversity of Gothenburg · SEBenha University · EGMichigan State University · US

Funding

Homogeneous Heparan Sulfate Glycopeptides: Synthetic and Functional StudiesR01GM072667 · NIGMS · UNIVERSITY OF TOLEDO · PI HUANG, XUEFEI · 2005 to 2024
$5.1M
NIGMS NIH HHS R01 GM072667
6 · The paper itself

Abstract

An early pathological hallmark of Alzheimer's disease (AD) is amyloid-β (Aβ) deposits in the brain, which largely consist of up to 43 amino acids long Aβ peptides derived from the amyloid precursor protein (APP). We previously identified a series of sialylated Tyr-10 O-glycosylated Aβ peptides, 15-20 residues long, from human cerebrospinal fluid (CSF) and observed a relative increase of those in AD vs non-AD patients. We report here on the synthesis and use of an isotopically double-labeled Aβ1-15 glycopeptide, carrying the core 1 Galβ3GalNAcα1-O-Tyr-10 structure, to (1) identify by HCD LC-MS/MS the definite glycan core 1 structure of immunopurified and desialylated Aβ glycopeptides in human CSF and to (2) establish a LC-MS/MS quantification method for desialylated Aβ1-15 (and Aβ1-17) glycopeptides and to (3) compare the concentrations of these Aβ glycopeptides in CSF from 20 AD patients and 20 healthy controls. Although we unambiguously identified the core 1 structures and Tyr-10 attachment sites of the glycopeptides, we did not observe any quantitative differences, determined through both peptide and oxonium ion fragments, of the desialylated Aβ1-15 or Aβ1-17 glycopeptides between the AD and non-AD group. The new quantitative glycoproteomic approach described, using double-labeled glycopeptide standards, will undoubtedly facilitate future studies of glycopeptides as clinical biomarkers but should also embrace sialylated Aβ standards to reveal specific sialylation patterns of individual Aβ glycopeptides in AD patients and controls.

Indexed as

AgedAlzheimer DiseaseAmyloid beta-PeptidesCase-Control StudiesChromatography, LiquidFemaleGlycopeptidesHumansMaleMiddle AgedMolecular StructureTandem Mass SpectrometryTyrosineAmyloid beta-PeptidesGlycopeptidesTyrosine

Identifiers

PMID30940835
PMCPMC6445081
OpenAlexW2925571658

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.