Evidence map›Paper›PMID 30940798›Full record

ArticleOncogenesis2019

Hypomethylation at non-CpG/CpG sites in the promoter of HIF-1α gene combined with enhanced H3K9Ac modification contribute to maintain higher HIF-1α expression in breast cancer.

Chun Li, Wei Xiong, Xiong Liu, Wenjun Xiao, Yuxian Guo, Junyu Tan, Yaochen Li

Open access · goldAbstract read
In one paragraph

Article in Oncogenesis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. HIF-1 and HIF-2 in cancer: structure, regulation, and therapeutic prospects.Cellular and molecular life sciences : CMLS · 2025
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. International journal of molecular sciences · 2023
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. DNMT3A and DNMT3B in Breast Tumorigenesis and Potential Therapy.Frontiers in cell and developmental biology · 2022
    Review
  17. Integrative Map ofGenes · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chun LiThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China.
Wei XiongThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China.
Xiong LiuThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China.
Wenjun XiaoThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China.
Yuxian GuoThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China.
Junyu TanThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China.
Yaochen LiThe central laboratory, of Cancer Hospital of Shantou University Medical College, No.7 Raoping Road, Shantou, 515031, China. yaochenli-2004@163.com.
Shantou University · CNCancer Hospital of Shantou University Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HIF-1α has a broad impact on tumors, including enhanced utilization of glucose, tumor cell stemness, migration, metastasis and so on. In pilot study, we found that the expression of HIF-1α significantly increased in breast cancer cell lines and tissue samples with higher malignant behaviors and decreased in luminal subtype breast cancer cells and tissue samples. We analyzed and found there is one large CpG island in HIF-1α promoter around transcription start site, and the hypermethylation occurred at these CpGs and their surrounding non-CpGs sites. Epigenetic events driving tumorigenesis has been characterized. However, knowledge is lacking on the non-CpGs methylation of HIF-1α promoter in breast cancer cells. We validated that non-CpGs methylation can directly regulate HIF-1α expression by luciferase activity assay. We also found DNMT3a and Mecp2 play vital role in methylation at non-CpGs and CpGs sites. In addition, we noticed that H3K9ac modification could promote the transcription of HIF-1α in MDA-MB-231 cells by binding to the region contained hypomethylated non-CpG and CpG sites. Taken together, the hypomethylation status at non-CpG and CpG loci in HIF-1α promoter and H3K9ac modification together contribute to maintain higher HIF-1αactivity in invasive breast cancer cells when compared with the non-invasive breast cancer cells, which may establish a tissue-specific epigenetic modification pattern and point to the new directions for future understanding breast cancer therapy.

Identifiers

PMID30940798
PMCPMC6445832
OpenAlexW2931896265

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.