Evidence map›Paper›PMID 30940729›Full record

ArticleThe Journal of biological chemistry2019

Non-canonical ubiquitination of the cholesterol-regulated degron of squalene monooxygenase.

Ngee Kiat Chua, Gene Hart-Smith, Andrew J Brown

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Squalene Epoxidase: Its Regulations and Links with Cancers.International journal of molecular sciences · 2024
    Pooled it
  2. Article
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  5. Article
  6. Article
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  9. Article
  10. Article
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  12. Article
  13. Thioester and Oxyester Linkages in the Ubiquitin System.Methods in molecular biology (Clifton, N.J.) · 2023
    Review
  14. Non-lysine ubiquitylation: Doing things differently.Frontiers in molecular biosciences · 2022
    Review
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ngee Kiat ChuaSchool of Biotechnology and Biomolecular Sciences, UNSW Sydney, New South Wales 2052, Australia.
Gene Hart-SmithSchool of Biotechnology and Biomolecular Sciences, UNSW Sydney, New South Wales 2052, Australia.
Andrew J BrownSchool of Biotechnology and Biomolecular Sciences, UNSW Sydney, New South Wales 2052, Australia. Electronic address: aj.brown@unsw.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Squalene monooxygenase (SM) is a rate-limiting enzyme in cholesterol synthesis. The region comprising the first 100 amino acids, termed SM N100, represents the shortest cholesterol-responsive degron and enables SM to sense excess cholesterol in the endoplasmic reticulum (ER) membrane. Cholesterol accelerates the ubiquitination of SM by membrane-associated ring-CH type finger 6 (MARCH6), a key E3 ubiquitin ligase involved in ER-associated degradation. However, the ubiquitination site required for cholesterol regulation of SM N100 is unknown. Here, we used SM N100 fused to GFP as a model degron to recapitulate cholesterol-mediated SM degradation and show that neither SM lysine residues nor the N terminus impart instability. Instead, we discovered four serines (Ser-59, Ser-61, Ser-83, and Ser-87) that are critical for cholesterol-accelerated degradation, with MS analysis confirming Ser-83 as a ubiquitination site. Notably, these two clusters of closely spaced serine residues are located in disordered domains flanking a 12-amino acid-long amphipathic helix (residues Gln-62-Leu-73) that together confer cholesterol responsiveness. In summary, our findings reveal the degron architecture of SM N100, introducing the role of non-canonical ubiquitination sites and deepening our molecular understanding of how SM is degraded in response to cholesterol.

Indexed as

ProteolysisUbiquitinationAnimalsCHO CellsCholesterolCricetulusEnzyme StabilityHumansMembrane ProteinsProtein DomainsProtein Structure, SecondarySqualene MonooxygenaseUbiquitin-Protein LigasesCholesterolMARCHF6 protein, humanMembrane ProteinsSqualene MonooxygenaseUbiquitin-Protein Ligasescholesterolcholesterol regulationdegronendoplasmic-reticulum-associated protein degradation (ERAD)lipid homeostasismembrane-associated ring-CH-type finger 6 (MARCH6)protein degradationSQLEsqualene monooxygenaseubiquitin

Identifiers

PMID30940729
PMCPMC6527178

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.