Evidence map›Paper›PMID 30940704›Full record

ArticlemBio2019

Human Influenza A Virus Hemagglutinin Glycan Evolution Follows a Temporal Pattern to a Glycan Limit.

Meghan O Altman, Matthew Angel, Ivan Košík, Nídia S Trovão, Seth J Zost, James S Gibbs, Lorenzo Casalino, Rommie E Amaro, Scott E Hensley, Martha I Nelson and 1 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  6. Review
  7. Article
  8. Host Glycan-Lectin Interplay in SARS-CoV-2 Infection.International journal of molecular sciences · 2026
    Review
  9. Interim 2025/26 influenza vaccine effectiveness estimates with immuno-epidemiological considerations for A(H3N2) subclade K protection, Canada, January 2026.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2026
    Article
  10. Article
  11. Emergence of seasonal influenza A(H3N2) variants with immune escape potential warrants enhanced molecular and epidemiological surveillance for the 2025-2026 season.Journal of the Association of Medical Microbiology and Infectious Disease Canada = Journal officiel de l'Association pour la microbiologie medicale et l'infectiologie Canada · 2025
    Article
  12. Journal of virology · 2025
    Article
  13. Article
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  15. Article
  16. Article
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  18. Article
  19. Article
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Meghan O AltmanCellular Biology Section, Laboratory of Viral Diseases NIAID, NIH, Bethesda, Maryland, USA meghan@altmans.org jyewdell@niaid.nih.gov.ORCID 0000-0002-8910-9074
Matthew AngelCellular Biology Section, Laboratory of Viral Diseases NIAID, NIH, Bethesda, Maryland, USA.
Ivan KošíkCellular Biology Section, Laboratory of Viral Diseases NIAID, NIH, Bethesda, Maryland, USA.ORCID 0000-0001-5756-5182
Nídia S TrovãoDivision of International Epidemiology and Population Studies, Fogarty International Center, NIH, Bethesda, Maryland, USA.
Seth J ZostDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0001-6712-5076
James S GibbsCellular Biology Section, Laboratory of Viral Diseases NIAID, NIH, Bethesda, Maryland, USA.
Lorenzo CasalinoDepartment of Chemistry and Biochemistry and the National Biomedical Computation Resource, University of California, San Diego, La Jolla, California, USA.ORCID 0000-0003-3581-1148
Rommie E AmaroDepartment of Chemistry and Biochemistry and the National Biomedical Computation Resource, University of California, San Diego, La Jolla, California, USA.
Scott E HensleyDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-2928-7506
Martha I NelsonDivision of International Epidemiology and Population Studies, Fogarty International Center, NIH, Bethesda, Maryland, USA.ORCID 0000-0003-4814-0179
Jonathan W YewdellCellular Biology Section, Laboratory of Viral Diseases NIAID, NIH, Bethesda, Maryland, USA meghan@altmans.org jyewdell@niaid.nih.gov.ORCID 0000-0002-3826-1906
National Institutes of Health · USFogarty International Center · USUniversity of California San Diego · USUniversity of Pennsylvania · US

Funding

Immunobiology and Virology of Influenza A VirusZIAAI001211 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI YEWDELL, JONATHAN W · 2016 to 2025
$10.4M
TRAINING IN VIROLOGYT32AI007324 · NIAID · WISTAR INSTITUTE · PI Paul Bates, Matthew D. Weitzman · 1989 to 2026
$6.8M
Impact of prior influenza exposures on antibody repertoires to new viral strainsR01AI108686 · NIAID · WISTAR INSTITUTE · PI HENSLEY, SCOTT ERIC · 2014 to 2022
$3.7M
The effect of human pre-exposure history on antigenic drift of influenza virusesR01AI113047 · NIAID · WISTAR INSTITUTE · PI HENSLEY, SCOTT ERIC · 2014 to 2018
$2.5M
NIAID NIH HHS R01 AI108686NIAID NIH HHS R01 AI113047NIAID NIH HHS T32 AI007324
6 · The paper itself

Abstract

Human antibody-based immunity to influenza A virus is limited by antigenic drift resulting from amino acid substitutions in the hemagglutinin (HA) head domain. Glycan addition can cause large antigenic changes but is limited by fitness costs to viral replication. Here, we report that glycans are added to H1 and H3 HAs at discrete 5-to-7-year intervals, until they reach a functional glycan limit, after which glycans are swapped at approximately 2-fold-longer intervals. Consistent with this pattern, 2009 pandemic H1N1 added a glycan at residue N162 over the 2015-2016 season, an addition that required two epistatic HA head mutations for complete glycosylation. These strains rapidly replaced H1N1 strains globally, by 2017 dominating H3N2 and influenza B virus strains for the season. The pattern of glycan modulation that we outline should aid efforts for tracing the epidemic potential of evolving human IAV strains.

Indexed as

Evolution, MolecularProtein Processing, Post-TranslationalGlycosylationHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A virusMutationPolysaccharidesHemagglutinin Glycoproteins, Influenza VirusPolysaccharidesglycosylationhemagglutininimmune evasioninfluenzaviral evolution

Identifiers

PMID30940704
PMCPMC6445938
OpenAlexW2935253846

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.