Evidence map›Paper›PMID 30940123›Full record

ArticleBMC public health2019

Sensitivity and specificity of routine diagnostic work-up for tuberculosis in lung clinics in Yogyakarta, Indonesia: a cohort study.

Antonia Morita I Saktiawati, Yanri W Subronto, Ymkje Stienstra, Sumardi, Fabiola Supit, Tjip S van der Werf

Registry-linked trialOpen access · goldAbstract readEvaluation Study
In one paragraph

Article in BMC public health, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02219945 (The Accuracy of the eNose in the Diagnostics and Monitoring of Treatment of Treatment-naive TB Patients), which is not on this map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02219945 nacompletednot on this map

The Accuracy of the eNose in the Diagnostics and Monitoring of Treatment of Treatment-naive TB Patients

TypeinterventionalSponsorTjip van der WerfRan2013 to 2017Enrolled389ConditionsPulmonary Tuberculosis Suspected, Other Specified Chronic Obstructive Pulmonary Disease, Pulmonary Tuberculosis TB (+) Histology, (-) BacteriologyArms5 min exhaled breath sampling with soft nose clamp
3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Diagnosing Tuberculosis: What Do New Technologies Allow Us to (Not) Do?Respiration; international review of thoracic diseases · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Antonia Morita I SaktiawatiFaculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Jalan Farmako no.1, Sekip Utara, Yogyakarta, 55281, Indonesia. a.morita@ugm.ac.id.ORCID http://orcid.org/0000-0001-5896-0846
Yanri W SubrontoFaculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Jalan Farmako no.1, Sekip Utara, Yogyakarta, 55281, Indonesia.
Ymkje StienstraUniversity of Groningen, University Medical Center Groningen, Department of Internal Medicine/ Infectious Diseases, Groningen, The Netherlands.
SumardiFaculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Jalan Farmako no.1, Sekip Utara, Yogyakarta, 55281, Indonesia.
Fabiola SupitFaculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Jalan Farmako no.1, Sekip Utara, Yogyakarta, 55281, Indonesia.
Tjip S van der WerfUniversity of Groningen, University Medical Center Groningen, Department of Internal Medicine/ Infectious Diseases, Groningen, The Netherlands.
Universitas Gadjah Mada · IDUniversity Medical Center Groningen · NL

Funding

Direktorat Jenderal Pendidikan Tinggi PhD scholarship
6 · The paper itself

Abstract

backgroundEstablishing a correct diagnosis is challenging. We aimed to investigate the sensitivity and specificity of routine tuberculosis (TB) diagnostic work-up in lung clinics in Indonesia, a country with the third highest TB burden and the second highest gap between notifications of TB cases and the best estimate of incident cases in the world.

methodsIn the lung clinics of the Province of Yogyakarta, Indonesia, we recruited all consecutive patients with symptoms suggesting TB, aged ≥18 years. Routine TB examination consisted of clinical evaluation, sputum smear microscopy, and chest radiography. For research purposes, we added sputum culture, Human Immunodeficiency Virus (HIV) testing, and follow-up for 1.5 years or 2.5 years if culture results disagreed with the initial clinical diagnosis. The initial diagnosis was considered incorrect if patients did not respond to treatment. We calculated sensitivity and specificity of the TB routine examination using culture and a composite reference standard (CRS - a combination of routine examination, culture, and follow-up) as the reference standards. All analyses were conducted with IBM SPSS Statistics 25 (IBM Corp., Armonk, NY, USA).

resultsBetween 2013 and 2015, we included 360 participants, and 21 were excluded due to incomplete data. Among those analyzed, 115 were initially diagnosed with smear-positive TB, 12 with smear-negative TB, and 212 non-TB. In 15 study participants, the diagnosis was changed after median 45 (range: 14-870) days; 14 participants initially not diagnosed with TB were later diagnosed with TB, while one subject initially diagnosed with TB actually did not have TB. Compared with culture and CRS, TB routine examination had sensitivity of 85% (95%CI: 77-91) and 90% (95%CI: 84-94), and specificity of 86.3% (95%CI: 81-91) and 99.5% (95%CI: 97-100), respectively.

conclusionsA combination of clinical evaluation with sputum microscopy and chest radiography provided high sensitivity and specificity in diagnosing TB in lung clinics; in only 4.4% the diagnosis was incorrect. There is a need to improve routine TB diagnostic work by using clinical evaluation, sputum smear microscopy, and chest radiography all together in other settings, such as in primary health centers.

trial registrationNCT02219945 , clinicaltrials.gov . Registered 19 August 2014 (retrospectively registered).

Indexed as

LungAdultDiagnostic Tests, RoutineFemaleHIV InfectionsHumansIndonesiaMaleMicroscopyMiddle AgedMycobacterium tuberculosisPneumoniaRadiographyReference StandardsRetrospective StudiesSensitivity and SpecificityCultureDiagnosisMicroscopyRadiographySensitivitySpecificityTuberculosis

Identifiers

PMID30940123
PMCPMC6444523
OpenAlexW2940672295

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.