Evidence map›Paper›PMID 30936523›Full record

ArticleNature chemistry2019

Prebiotic phosphorylation of 2-thiouridine provides either nucleotides or DNA building blocks via photoreduction.

Jianfeng Xu, Nicholas J Green, Clémentine Gibard, Ramanarayanan Krishnamurthy, John D Sutherland

Abstract read
In one paragraph

Article in Nature chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Nonenzymatic RNA copying with a potentially primordial genetic alphabet.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Review
  5. Protocellular Heme and Iron-Sulfur Clusters.Accounts of chemical research · 2024
    Review
  6. Article
  7. Review
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  9. Article
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  18. Radicals in Biology: Your Life Is in Their Hands.Journal of the American Chemical Society · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jianfeng XuMRC Laboratory of Molecular Biology, Cambridge, UK.ORCID http://orcid.org/0000-0002-9123-9097
Nicholas J GreenMRC Laboratory of Molecular Biology, Cambridge, UK.ORCID http://orcid.org/0000-0002-3874-7359
Clémentine GibardDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.
Ramanarayanan KrishnamurthyDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA. rkrishna@scripps.edu.ORCID http://orcid.org/0000-0001-5238-610X
John D SutherlandMRC Laboratory of Molecular Biology, Cambridge, UK. johns@mrc-lmb.cam.ac.uk.ORCID http://orcid.org/0000-0001-7099-4731
MRC Laboratory of Molecular Biology · GBScripps Research Institute · US

Funding

Medical Research Council MC_UP_A024_1009
6 · The paper itself

Abstract

Breakthroughs in the study of the origin of life have demonstrated how some of the building blocks essential to biology could have been formed under various primordial scenarios, and could therefore have contributed to the chemical evolution of life. Missing building blocks are then sometimes inferred to be products of primitive biosynthesis, which can stretch the limits of plausibility. Here, we demonstrate the synthesis of 2'-deoxy-2-thiouridine, and subsequently 2'-deoxyadenosine and 2-deoxyribose, under prebiotic conditions. 2'-Deoxy-2-thiouridine is produced by photoreduction of 2,2'-anhydro-2-thiouridine, which is in turn formed by phosphorylation of 2-thiouridine-an intermediate of prebiotic RNA synthesis. 2'-Deoxy-2-thiouridine is an effective deoxyribosylating agent and may have functioned as such in either abiotic or proto-enzyme-catalysed pathways to DNA, as demonstrated by its conversion to 2'-deoxyadenosine by reaction with adenine, and 2-deoxyribose by hydrolysis. An alternative prebiotic phosphorylation of 2-thiouridine leads to the formation of its 5'-phosphate, showing that hypotheses in which 2-thiouridine was a key component of early RNA sequences are within the bounds of synthetic credibility.

Indexed as

Evolution, ChemicalDeoxyadenosinesModels, ChemicalOxidation-ReductionPhosphorylationThiouridineUltraviolet Rays2'-deoxyadenosine2-thiouridineDeoxyadenosinesThiouridine

Identifiers

PMID30936523
PMCPMC6597365
OpenAlexW2933437492

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.