Evidence map›Paper›PMID 30936483›Full record

ArticleNature microbiology2019

Hypoxia-induced human deoxyribonuclease I is a cellular restriction factor of hepatitis B virus.

Camille Hallez, Xiongxiong Li, Rodolphe Suspène, Valérie Thiers, Mohamed S Bouzidi, Cristina M Dorobantu, Vincent Lucansky, Simon Wain-Hobson, Raphaël Gaudin, Jean-Pierre Vartanian

Abstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Neutrophil Extracellular Traps in Viral Infections.Pathogens (Basel, Switzerland) · 2025
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Impact of Hypoxia over Human Viral Infections and Key Cellular Processes.International journal of molecular sciences · 2021
    Review
  12. Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 4 countries.

Camille HallezMolecular Retrovirology Unit, Institut Pasteur, Paris, France.
Xiongxiong LiMolecular Retrovirology Unit, Institut Pasteur, Paris, France.
Rodolphe SuspèneMolecular Retrovirology Unit, Institut Pasteur, Paris, France.
Valérie ThiersMolecular Retrovirology Unit, Institut Pasteur, Paris, France.
Mohamed S BouzidiMolecular Retrovirology Unit, Institut Pasteur, Paris, France.
Cristina M DorobantuInstitute of Viral and Liver Disease Unit, INSERM, Université de Strasbourg, Strasbourg, France.
Vincent LucanskyInstitute of Viral and Liver Disease Unit, INSERM, Université de Strasbourg, Strasbourg, France.
Simon Wain-HobsonMolecular Retrovirology Unit, Institut Pasteur, Paris, France.
Raphaël GaudinInstitute of Viral and Liver Disease Unit, INSERM, Université de Strasbourg, Strasbourg, France. raphael.gaudin@irim.cnrs.fr.ORCID http://orcid.org/0000-0002-8558-8143
Jean-Pierre VartanianMolecular Retrovirology Unit, Institut Pasteur, Paris, France. jean-pierre.vartanian@pasteur.fr.ORCID http://orcid.org/0000-0001-8079-8814
Institut Pasteur · FRInserm · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Numerous human APOBEC3 cytidine deaminases have proven to be, inter alia, host cell restriction factors for retroviruses and hepadnaviruses. Although they can bind to genomic RNA and become encapsidated, they are only catalytically active on single-stranded DNA. As there are many cellular deoxyribonucleases (DNases), we hypothesized that a parallel could be struck between APOBEC3 and DNases. For human hepatitis B virus (HBV), we show that DNase I can considerably reduce the virion genome copy number from a variety of transfected or infected cells. DNASE1 is overexpressed and encapsidated in HBV particles in vitro in hypoxic environments and in vivo in cirrhotic patient livers as well as in the serum of infected patients. The use of CoCl

Indexed as

HypoxiaVirus ReplicationCell LineCobaltDeoxyribonuclease IDNA, ViralGene ExpressionGene Expression Regulation, EnzymologicHepatitis BHepatitis B Core AntigensHepatitis B virusHumansHypoxia-Inducible Factor 1Liver CirrhosisMutationVirionCobaltcobaltous chlorideDeoxyribonuclease IDNASE1 protein, humanDNA, ViralHepatitis B Core AntigensHypoxia-Inducible Factor 1

Identifiers

PMID30936483
OpenAlexW2932084234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.