Evidence map›Paper›PMID 30936373›Full record

ArticleJournal of bacteriology2019

Crystal Structure of VapBC-1 from Nontypeable Haemophilus influenzae and the Effect of PIN Domain Mutations on Survival during Infection.

Ashley L Molinaro, Maithri M Kashipathy, Scott Lovell, Kevin P Battaile, Nathan P Coussens, Min Shen, Dayle A Daines

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ashley L MolinaroOffice of the Dean, College of Sciences, Old Dominion University, Norfolk, Virginia, USA.
Maithri M KashipathyProtein Structure Laboratory, Del Shankel Structural Biology Center, University of Kansas, Lawrence, Kansas, USA.
Scott LovellProtein Structure Laboratory, Del Shankel Structural Biology Center, University of Kansas, Lawrence, Kansas, USA.
Kevin P BattaileIMCA-CAT, Hauptman Woodward Medical Research Institute, Argonne, Illinois, USA.
Nathan P CoussensDivision of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland, USA.
Min ShenDivision of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland, USA.
Dayle A DainesOffice of the Dean, College of Sciences, Old Dominion University, Norfolk, Virginia, USA ddaines@odu.edu.ORCID 0000-0002-9610-436X
Dean College · USNational Institutes of Health · USUniversity of Kansas · USHauptman-Woodward Medical Research Institute · US

Funding

Protein Structure Laboratory P30GM110761 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2014 to 2018
$5.6M
High Throughput Screening to Discover Novel Toxin Inhibitors Relevant to the Treatment of Otitis MediaU01DC014756 · NIDCD · OLD DOMINION UNIVERSITY · PI DAINES, DAYLE ANITA · 2015 to 2017
$1.0M
NIDCD NIH HHS U01 DC014756NIGMS NIH HHS P30 GM110761
6 · The paper itself

Abstract

Toxin-antitoxin (TA) gene pairs have been identified in nearly all bacterial genomes sequenced to date and are thought to facilitate persistence and antibiotic tolerance. TA loci are classified into various types based upon the characteristics of their antitoxins, with those in type II expressing proteic antitoxins. Many toxins from type II modules are ribonucleases that maintain a PilT N-terminal (PIN) domain containing conserved amino acids considered essential for activity. The

Indexed as

Toxin-Antitoxin SystemsAmino Acid SequenceBacterial ProteinsBacterial ToxinsCrystallizationDNA-Binding ProteinsEscherichia coliGene Expression Regulation, BacterialHaemophilus influenzaeHumansMembrane GlycoproteinsModels, MolecularMutagenesis, Site-DirectedMutationOperonPromoter Regions, GeneticBacterial ProteinsBacterial ToxinsDNA-Binding ProteinsMembrane GlycoproteinsVapB protein, Bacteriacrystal structurepersistencePIN domainprotein-protein interactionsribonucleasetoxin-antitoxin

Identifiers

PMID30936373
PMCPMC6531621
OpenAlexW2927167109

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.