Evidence map›Paper›PMID 30932271›Full record

ArticleStem cells (Dayton, Ohio)2019

CRISPR-Knockout Screen Identifies Dmap1 as a Regulator of Chemically Induced Reprogramming and Differentiation of Cardiac Progenitors.

Jason S L Yu, Giorgia Palano, Cindy Lim, Aldo Moggio, Lauren Drowley, Alleyn T Plowright, Mohammad Bohlooly-Y, Barry S Rosen, Emil M Hansson, Qing-Dong Wang and 1 more

Abstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Direct Cardiac Reprogramming in the Age of Computational Biology.Journal of cardiovascular development and disease · 2024
    Review
  6. Review
  7. Article
  8. Review
  9. CRISPR screening in cardiovascular research.Frontiers in cell and developmental biology · 2023
    Review
  10. Direct Cardiac Reprogramming: Current Status and Future Prospects.Advances in experimental medicine and biology · 2023
    Review
  11. Genome Editing and Cardiac Regeneration.Advances in experimental medicine and biology · 2023
    Article
  12. Article
  13. Review
  14. Cell Reprogramming With CRISPR/Cas9 Based Transcriptional Regulation Systems.Frontiers in bioengineering and biotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jason S L YuStem Cell Genetics, Wellcome Sanger Institute, Hinxton, Cambridge, United Kingdom.ORCID 0000-0001-5203-3603
Giorgia PalanoKI/AZ Integrated CardioMetabolic Center (ICMC), Department of Medicine, Karolinska Institutet, Huddinge, Sweden.
Cindy LimBioscience Heart Failure, Cardiovascular, Renal and Metabolism, IMED Biotech Unit, AstraZeneca, Gothenburg, Sweden.
Aldo MoggioKI/AZ Integrated CardioMetabolic Center (ICMC), Department of Medicine, Karolinska Institutet, Huddinge, Sweden.
Lauren DrowleyBioscience Heart Failure, Cardiovascular, Renal and Metabolism, IMED Biotech Unit, AstraZeneca, Gothenburg, Sweden.
Alleyn T PlowrightMedicinal Chemistry, Cardiovascular, Renal and Metabolism, IMED Biotech Unit, AstraZeneca, Gothenburg, Sweden.
Mohammad Bohlooly-YDiscovery Sciences, IMED Biotech Unit, AstraZeneca, Gothenburg, Sweden.
Barry S RosenDiscovery Sciences, IMED Biotech Unit, AstraZeneca, Gothenburg, Sweden.
Emil M HanssonKI/AZ Integrated CardioMetabolic Center (ICMC), Department of Medicine, Karolinska Institutet, Huddinge, Sweden.
Qing-Dong WangBioscience Heart Failure, Cardiovascular, Renal and Metabolism, IMED Biotech Unit, AstraZeneca, Gothenburg, Sweden.
Kosuke YusaStem Cell Genetics, Wellcome Sanger Institute, Hinxton, Cambridge, United Kingdom.

Funding

Wellcome TrustWellcome Trust WT206194
6 · The paper itself

Abstract

Direct in vivo reprogramming of cardiac fibroblasts into myocytes is an attractive therapeutic intervention in resolving myogenic deterioration. Current transgene-dependent approaches can restore cardiac function, but dependence on retroviral delivery and persistent retention of transgenic sequences are significant therapeutic hurdles. Chemical reprogramming has been established as a legitimate method to generate functional cell types, including those of the cardiac lineage. Here, we have extended this approach to generate progenitor cells that can differentiate into endothelial cells and cardiomyocytes using a single inhibitor protocol. Depletion of terminally differentiated cells and enrichment for proliferative cells result in a second expandable progenitor population that can robustly give rise to myofibroblasts and smooth muscle. Deployment of a genome-wide knockout screen with clustered regularly interspaced short palindromic repeats-guide RNA library to identify novel mediators that regulate the reprogramming revealed the involvement of DNA methyltransferase 1-associated protein 1 (Dmap1). Loss of Dmap1 reduced promoter methylation, increased the expression of Nkx2-5, and enhanced the retention of self-renewal, although further differentiation is inhibited because of the sustained expression of Cdh1. Our results hence establish Dmap1 as a modulator of cardiac reprogramming and myocytic induction. Stem Cells 2019;37:958-972.

Indexed as

CRISPR-Cas SystemsAnimalsBenzamidesCadherinsCell DifferentiationCell ProliferationCellular ReprogrammingDioxolesFibroblastsGene EditingHomeobox Protein Nkx-2.5HumansMiceMice, Inbred C57BLMice, KnockoutMuscle, Smooth4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideBenzamidesCadherinsCdh1 protein, mouseDioxolesDmap1 protein, mouseHomeobox Protein Nkx-2.5Nkx2-5 protein, mousePyrazolesPyridinesRepressor ProteinsRepSoxRNA, Guide, CRISPR-Cas SystemsCardiac progenitorsChemical reprogrammingClustered regularly interspaced short palindromic repeats-Cas9CpG methylationGenome-wide screen

Identifiers

PMID30932271
PMCPMC6767549

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.