Evidence map›Paper›PMID 30931048›Full record

ArticleJournal of computational science2018

A Twofold Usage of an Agent-Based Model of Vascular Adaptation to Design Clinical Experiments.

Stefano Casarin, Scott A Berceli, Marc Garbey

Abstract read
In one paragraph

Article in Journal of computational science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Stefano CasarinCenter for Computational Surgery, Houston Methodist Research Institute, Houston, TX, USA.
Scott A BerceliDepartment of Surgery, University of Florida, Gainesville, FL, USA.
Marc GarbeyCenter for Computational Surgery, Houston Methodist Research Institute, Houston, TX, USA.

Funding

Constitutive and Agent-Based Multiscale Models to Improve Vein Graft SurvivalU01HL119178 · NHLBI · UNIVERSITY OF FLORIDA · PI BERCELI, SCOTT A, GARBEY, MARC · 2013 to 2018
$2.7M
NHLBI NIH HHS U01 HL119178
6 · The paper itself

Abstract

Several computational models of Vein Graft Bypass (VGB) adaptation have been developed in order to improve the surgical outcome and they all share a common property: their accuracy relies on a winning choice of their driving coefficients which are best to be retrieved from experimental data. Since experiments are time-consuming and resources-demanding, the golden standard is to know in advance which measures need to be retrieved on the experimental table and out of how many samples. Accordingly, our goal is to build a computational framework able to pre-design an effective experimental structure to optimize the computational models setup. Our hypothesis is that an Agent-Based Model (ABM) developed by our group is comparable enough to a true set of experiments to be used to generate reliable virtual experimental data. Thanks to a twofold usage of our ABM, we created a filter to be posed before the real experiment in order to drive its optimal design. This work is the natural continuation of a previous study from our group [1], where the attention was posed on simple single-cellular events models. With this new version we focused on more complex models with the purpose of verifying that the complexity of the experimental setup grows proportionally with the accuracy of the model itself.

Indexed as

Agent-Based ModelExperiment PlanningVirtual Dataset

Identifiers

PMID30931048
PMCPMC6438199

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.