Evidence map›Paper›PMID 30930117›Full record

ArticleCancer cell2019

Human Tumor-Associated Macrophage and Monocyte Transcriptional Landscapes Reveal Cancer-Specific Reprogramming, Biomarkers, and Therapeutic Targets.

Luca Cassetta, Stamatina Fragkogianni, Andrew H Sims, Agnieszka Swierczak, Lesley M Forrester, Hui Zhang, Daniel Y H Soong, Tiziana Cotechini, Pavana Anur, Elaine Y Lin and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 614 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
614citing papers in PubMed, 2 pooled it
42.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

614 citing papers in PubMed, 2 syntheses or guidelines pooled it, 933 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Trial
  5. Trial
  6. Trial
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Monocyte-Amplified Transcriptional Signatures of Human Diseases.bioRxiv : the preprint server for biology · 2026
    Article
  17. Review
  18. Review
  19. Article
  20. Review

554 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 2 countries.

Luca CassettaMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK.
Stamatina FragkogianniMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK.
Andrew H SimsApplied Bioinformatics of Cancer, University of Edinburgh Cancer Research Centre, Institute of Genetics and Molecular Medicine, Edinburgh EH4 2XR, UK.
Agnieszka SwierczakMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK.
Lesley M ForresterMRC Centre for Regenerative Medicine, University of Edinburgh, Edinburgh EH16 4UU, UK.
Hui ZhangDepartment of Developmental and Molecular Biology, Albert Einstein College of Medicine, New York 10461, USA.
Daniel Y H SoongMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK.
Tiziana CotechiniDepartment of Cell, Developmental & Cancer Biology, and Knight Cancer Institute, Oregon Health & Science University, Portland 97239, USA.
Pavana AnurDepartment of Molecular and Medical Genetics and Knight Cancer Institute, Oregon Health & Science University, Portland 97239, USA.
Elaine Y LinDepartment of Cell, Developmental & Cancer Biology, and Knight Cancer Institute, Oregon Health & Science University, Portland 97239, USA.
Antonella FidanzaMRC Centre for Regenerative Medicine, University of Edinburgh, Edinburgh EH16 4UU, UK.
Martha Lopez-YrigoyenMRC Centre for Regenerative Medicine, University of Edinburgh, Edinburgh EH16 4UU, UK.
Michael R MillarMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK; Aquila Biomedical, Edinburgh Bioquarter, Little France Road, Edinburgh EH16 4TJ, UK.
Alexandra UrmanDepartment of Surgery, Montefiore Medical College, New York 10467, USA.
Zhichao AiMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK.
Paul T SpellmanDepartment of Molecular and Medical Genetics and Knight Cancer Institute, Oregon Health & Science University, Portland 97239, USA.
E Shelley HwangDepartment of Surgery, Duke University Medical Center, Durham, NC 27710, USA.
J Michael DixonEdinburgh Breast Unit and Breast Cancer Now Research Unit, University of Edinburgh, Edinburgh EH4 2XU, UK.
Lisa WiechmannDepartment of Surgery, Montefiore Medical College, New York 10467, USA.
Lisa M CoussensDepartment of Cell, Developmental & Cancer Biology, and Knight Cancer Institute, Oregon Health & Science University, Portland 97239, USA.
Harriet O SmithDepartment of Obstetrics and Gynecology, Albert Einstein College of Medicine and Montefiore Medical Center, New York 10461, USA.
Jeffrey W PollardMRC Centre for Reproductive Health, Queen's Medical Research Institute, The University of Edinburgh, Edinburgh EH16 4TJ, UK; Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, New York 10461, USA. Electronic address: jeff.pollard@ed.ac.uk.
University of Edinburgh · GBOregon Health & Science University · USMontefiore Medical Center · USMRC Centre for Reproductive Health · GBAlbert Einstein College of Medicine · USDuke Medical Center · USEdinburgh Cancer Research · GBMRC Centre for Regenerative Medicine · GBQueen's Medical Centre · GB

Funding

Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI DONNA NIEDZWIECKI · 1985 to 2026
$174.8M
Tumor Progression and MetastasisP01CA100324 · NCI · YESHIVA UNIVERSITY · PI CONDEELIS, JOHN S · 2003 to 2018
$30.0M
Medical Research Council G1002033Medical Research Council MC_PC_15027Medical Research Council MR/K017047/1Medical Research Council MR/N022556/1NCI NIH HHS P01 CA100324NCI NIH HHS P30 CA014236Wellcome Trust 101067/Z/13/ZWellcome Trust 102610
6 · The paper itself

Abstract

The roles of tumor-associated macrophages (TAMs) and circulating monocytes in human cancer are poorly understood. Here, we show that monocyte subpopulation distribution and transcriptomes are significantly altered by the presence of endometrial and breast cancer. Furthermore, TAMs from endometrial and breast cancers are transcriptionally distinct from monocytes and their respective tissue-resident macrophages. We identified a breast TAM signature that is highly enriched in aggressive breast cancer subtypes and associated with shorter disease-specific survival. We also identified an auto-regulatory loop between TAMs and cancer cells driven by tumor necrosis factor alpha involving SIGLEC1 and CCL8, which is self-reinforcing through the production of CSF1. Together these data provide direct evidence that monocyte and macrophage transcriptional landscapes are perturbed by cancer, reflecting patient outcomes.

Indexed as

Cellular ReprogrammingParacrine CommunicationTranscription, GeneticAntineoplastic AgentsBiomarkers, TumorBreast NeoplasmsChemokine CCL8Endometrial NeoplasmsFemaleGene Expression Regulation, NeoplasticHumansInduced Pluripotent Stem CellsMacrophage Colony-Stimulating FactorMacrophagesMolecular Targeted TherapyMonocytesAntineoplastic AgentsBiomarkers, TumorCCL8 protein, humanChemokine CCL8CSF1 protein, humanMacrophage Colony-Stimulating FactorSialic Acid Binding Ig-like Lectin 1SIGLEC1 protein, humanbreast cancerCCL8endometrial cancerhuman circulating monocyteshuman macrophagesSIGLEC1tumor microenvironment

Identifiers

PMID30930117
PMCPMC6472943
OpenAlexW2931512726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.