Evidence map›Paper›PMID 30929162›Full record

ArticleMolecular biology reports2019

The challenge of determining the impact of FUT3 tumor-associated polymorphism rs2306969 (-6951 C> T) in invasive breast cancer cells.

Jessica Catarine Frutuoso do Nascimento, Anderson de Oliveira Vasconcelos, Maria Aparecida Barreto Lopes Seabra, Eduardo Isidoro Carneiro Beltrão, Cíntia Renata Costa Rocha

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In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jessica Catarine Frutuoso do NascimentoLaboratório de Imunopatologia Keizo Asami, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Recife, 50670-901, Brazil.
Anderson de Oliveira VasconcelosDepartamento de Bioquímica, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Recife, 50670-901, Brazil.
Maria Aparecida Barreto Lopes SeabraLaboratório de Imunopatologia Keizo Asami, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Recife, 50670-901, Brazil.
Eduardo Isidoro Carneiro BeltrãoLaboratório de Imunopatologia Keizo Asami, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Recife, 50670-901, Brazil.
Cíntia Renata Costa RochaLaboratório de Imunopatologia Keizo Asami, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Recife, 50670-901, Brazil. cintia.rocha@ufpe.br.ORCID http://orcid.org/0000-0002-3366-3615
Universidade Federal de Pernambuco · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico Universal-CNPq 480291/2011-0
6 · The paper itself

Abstract

FUT3 gene is responsible for encode an homonymous α1,3/4-fucosyltransferase involved in the synthesis of sialyl-Lewis antigens. FUT3-fucosylated glycoconjugates play key roles in pathways involved in tumor biology and metastasis, such as cellular ligation to E-selectins, TGF-β-induced epithelial-mesenchymal transition, NK cell-mediated tumor cytotoxicity and apoptosis. Tumor-associated FUT3 promoter polymorphism rs2306969 (-6951 C> T, position related to the gene's translation start site) has been linked to breast, ovarian and intestinal gastric cancer. Although non-coding polymorphisms accounts for the majority of variations founded in breast cancer, their functional roles are still poorly understood. This study aimed to investigate the impact of different alleles for this variation in FUT3 expression of invasive breast tumors. A luciferase reporter assay was performed using two breast tumor cell lines to evaluate respectively the impact of FUT3 rs2306969 (-6951 CC) and (-6951 TT) on protein expression. Gene and protein expressions were also measured in twenty-nine fresh biopsies of invasive breast tumors. Rs2306969 did not significantly influence FUT3 expression in both used systems. However, this study is defiant since the biological role of this polymorphism in breast cancer and other tumor types could be linked to cis/trans modulation of other genes, respond to different environmental stimuli or impact gene expression only in association with other variations. Rs2306969 did not modulate FUT3 expression in breast tumors under non-stimulated conditions. Nevertheless, our study contributes to the notably challenging task that is to understand how non-coding polymorphisms can drive the overall risk in cancer development.

Indexed as

AllelesBiomarkers, TumorBreast NeoplasmsCell Line, TumorEpithelial-Mesenchymal TransitionFemaleFucosyltransferasesGene Expression Regulation, NeoplasticGene FrequencyGenetic Predisposition to DiseaseHumansPolymorphism, Single NucleotideRisk FactorsTransforming Growth Factor beta3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferaseBiomarkers, TumorFucosyltransferasesFUT4 protein, humanTransforming Growth Factor betaBreast cancerNon-coding single nucleotide polymorphismSNP functional analysisα1,3/4-Fucosyltransferase

Identifiers

PMID30929162
OpenAlexW2932418414

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.