Evidence map›Paper›PMID 30928102›Full record

ArticleBiochemical and biophysical research communications2019

A PKD1L3 splice variant in taste buds is not cleaved at the G protein-coupled receptor proteolytic site.

Parul Kashyap, Courtney Ng, Zhifei Wang, Bin Li, Mahmud Arif Pavel, Hannah Martin, Yong Yu

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Polycystin Channel Complexes.Annual review of physiology · 2023
    Review
  2. Article
  3. The GPCR properties of polycystin-1- A new paradigm.Frontiers in molecular biosciences · 2022
    Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Parul KashyapDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA.
Courtney NgDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA.
Zhifei WangDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA.
Bin LiDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA.
Mahmud Arif PavelDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA.
Hannah MartinDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA.
Yong YuDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, New York, 11439, USA. Electronic address: yuy2@stjohns.edu.
St. John's University · US

Funding

Research BaseP30DK090868 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI WATNICK, TERRY J · 2010 to 2019
$11.1M
FUNCTION AND REGULATION OF TRPP2, AND ITS ROLE IN ADPKDR15DK102092 · NIDDK · ST. JOHN'S UNIVERSITY · PI YU, YONG · 2014 to 2014
$495k
NIDDK NIH HHS R15 DK102092
6 · The paper itself

Abstract

Mutations in polycystin proteins PKD1 and TRPP2 lead to autosomal dominant polycystic kidney disease. These two proteins form a receptor-ion channel complex on primary cilia. PKD1 undergoes an autoproteolysis at the N terminal G-protein-coupled receptor proteolytic site (GPS), which is essential for the function of PKD1. Whether GPS cleavage happens in other PKD proteins and its functional consequence has remained elusive. Here we studied the GPS cleavage of PKD1L3, a protein that associates with TRPP3 in taste cells and may play a role in sour taste. Our results show that PKD1L3 also undergoes GPS cleavage. Mutation at the GPS abolishes the cleavage, and the non-cleavable mutant does not traffic to the plasma membrane when associated with TRPP3. We also found that a splice variant of PKD1L3, which was originally identified in taste buds, is not cleaved. Amino acids L708 and S709, which are missing in this splice variant, are crucial for the GPS cleavage of PKD1L3 and the trafficking of the PKD1L3/TRPP3 complex. Our results gain insight into the molecular mechanism of the GPS cleavage of PKD1L3. The presence of the non-cleavable variant suggests the potential in vivo function of uncleaved PKD proteins.

Indexed as

AnimalsCalcium ChannelsCell MembraneHEK293 CellsHumansLeucineMiceOocytesProtein IsoformsReceptors, Cell SurfaceReceptors, G-Protein-CoupledSerineTaste BudsXenopusCalcium ChannelsLeucinePKD1L3 protein, mousePKD2L1 protein, humanProtein IsoformsReceptors, Cell SurfaceReceptors, G-Protein-CoupledSerineAlternative splicingGPS cleavagePKD1L3Polycystic kidney diseasePolycystinTRPP3

Identifiers

PMID30928102
PMCPMC6467730
OpenAlexW2923509811

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.