Evidence map›Paper›PMID 30927013›Full record

ReviewAnalytical and bioanalytical chemistry2019

Optical approaches for single-cell and subcellular analysis of GPCR-G protein signaling.

Dinesh Kankanamge, Kasun Ratnayake, Kanishka Senarath, Mithila Tennakoon, Elise Harmon, Ajith Karunarathne

Open access · greenAbstract readReview
In one paragraph

Review in Analytical and bioanalytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dinesh KankanamgeDepartment of Chemistry and Biochemistry, The University of Toledo, 2801 W. Bancroft, Toledo, OH, 43606, USA.
Kasun RatnayakeDepartment of Chemistry and Biochemistry, The University of Toledo, 2801 W. Bancroft, Toledo, OH, 43606, USA.
Kanishka SenarathDepartment of Chemistry and Biochemistry, The University of Toledo, 2801 W. Bancroft, Toledo, OH, 43606, USA.
Mithila TennakoonDepartment of Chemistry and Biochemistry, The University of Toledo, 2801 W. Bancroft, Toledo, OH, 43606, USA.
Elise HarmonDepartment of Chemistry and Biochemistry, The University of Toledo, 2801 W. Bancroft, Toledo, OH, 43606, USA.
Ajith KarunarathneDepartment of Chemistry and Biochemistry, The University of Toledo, 2801 W. Bancroft, Toledo, OH, 43606, USA. Ajith.karunarathne@utoledo.edu.
University of Toledo · US

Funding

Diverse membrane affinities of Gγ members deferentially modulate the Gβγ effectors and cell behaviorsR15GM126455 · NIGMS · UNIVERSITY OF TOLEDO · PI KARUNARATHNE, WELIVITIYA KANKANAMLAGE AJITH · 2018 to 2018
$441k
National Institute of General Medical Sciences 1R15GM126455-01A1NIGMS NIH HHS R15 GM126455
6 · The paper itself

Abstract

G protein-coupled receptors (GPCRs), G proteins, and their signaling associates are major signal transducers that control the majority of cellular signaling and regulate key biological functions including immune, neurological, cardiovascular, and metabolic processes. These pathways are targeted by over one-third of drugs on the market; however, the current understanding of their function is limited and primarily derived from cell-destructive approaches providing an ensemble of static, multi-cell information about the status and composition of molecules. Spatiotemporal behavior of molecules involved is crucial to understanding in vivo cell behaviors both in health and disease, and the advent of genetically encoded fluorescence proteins and small fluorophore-based biosensors has facilitated the mapping of dynamic signaling in cells with subcellular acuity. Since we and others have developed optogenetic methods to regulate GPCR-G protein signaling in single cells and subcellular regions using dedicated wavelengths, the desire to develop and adopt optogenetically amenable assays to measure signaling has motivated us to take a broader look at the available optical tools and approaches compatible with measuring single-cell and subcellular GPCR-G protein signaling. Here we review such key optical approaches enabling the examination of GPCR, G protein, secondary messenger, and downstream molecules such as kinase and lipid signaling in living cells. The methods reviewed employ both fluorescence and bioluminescence detection. We not only further elaborate the underlying principles of these sensors but also discuss the experimental criteria and limitations to be considered during their use in single-cell and subcellular signal mapping.

Indexed as

Signal TransductionSingle-Cell AnalysisFluorescenceGene ExpressionGTP-Binding ProteinsHumansProtein BindingReceptors, G-Protein-CoupledSubcellular FractionsGTP-Binding ProteinsReceptors, G-Protein-CoupledBRETFluorescenceFRETGPCRG proteinImagingMicroscopyReal-time assaySignal transductionSingle-cell analysisTranslocation

Identifiers

PMID30927013
PMCPMC6612303
OpenAlexW2928876030

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.