Evidence map›Paper›PMID 30926971›Full record

ArticleNature genetics2019

Genomic subtyping and therapeutic targeting of acute erythroleukemia.

Ilaria Iacobucci, Ji Wen, Manja Meggendorfer, John K Choi, Lei Shi, Stanley B Pounds, Catherine L Carmichael, Katherine E Masih, Sarah M Morris, R Coleman Lindsley and 38 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 165 citations in OpenAlex.

  1. Immunophenotypic, Cytogenetic, and Molecular Characterization of NUP98-Rearranged Pediatric Myeloid Neoplasms.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2026
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  12. Review
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  14. Novel Mutations in Acute Erythroid Leukemia-A Case Report with Review of Literature.Indian journal of hematology & blood transfusion : an official journal of Indian Society of Hematology and Blood Transfusion · 2025
    Article
  15. Article
  16. [Clinical characteristics and prognosis of acute erythroleukemia in children].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2025
    Article
  17. Review
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors at 16 institutions in 6 countries.

Ilaria IacobucciDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Ji WenDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Manja MeggendorferMLL Munich Leukemia Laboratory, Munich, Germany.
John K ChoiDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Lei ShiDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Stanley B PoundsDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-9167-2114
Catherine L CarmichaelThe Australian Centre for Blood Diseases, Monash University, Melbourne, Victoria, Australia.
Katherine E MasihDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-0809-668X
Sarah M MorrisDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
R Coleman LindsleyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Laura J JankeDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Thomas B AlexanderDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-0484-1574
Guangchun SongDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Chunxu QuDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Yongjin LiDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Debbie Payne-TurnerDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Daisuke TomizawaDivision of Leukemia and Lymphoma, Children's Cancer Center, National Center for Child Health and Development, Tokyo, Japan.ORCID http://orcid.org/0000-0003-1520-7007
Nobutaka KiyokawaDepartment of Pediatric Hematology and Oncology Research, National Research Institute for Child Health and Development, Tokyo, Japan.
Marcus ValentineCytogenetics Shared Resource, St. Jude Children's Research Hospital, Memphis, TN, USA.
Virginia ValentineCytogenetics Shared Resource, St. Jude Children's Research Hospital, Memphis, TN, USA.
Giuseppe BassoClinic of Paediatric Haematology and Oncology, Department for Children's and Women's Health, University of Padua, Padua, Italy.
Franco LocatelliDepartment of Gynecology/Obstetrics and Pediatrics, Sapienza University of Rome, Rome, Italy.
Eric J EnemarkDepartment of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Shirley K Y KhamCentre for Translational Research in Acute Leukaemia, Department of Paediatrics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Allen E J YeohCentre for Translational Research in Acute Leukaemia, Department of Paediatrics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.ORCID http://orcid.org/0000-0002-6454-976X
Xiaotu MaDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Xin ZhouDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Edgar SiosonDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Michael RuschDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-5363-1848
Rhonda E RiesFred Hutchinson Cancer Research Center, Seattle, WA, USA.
Elliot StieglitzDepartment of Pediatrics, Benioff Children's Hospital, and the Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0001-7032-4623
Stephen P HungerDivision of Oncology and Center for Childhood Cancer Research, Children's Hospital of Philadelphia and the Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA.
Andrew H WeiThe Australian Centre for Blood Diseases, Monash University, Melbourne, Victoria, Australia.
L Bik ToDepartments of Haematology, SA Pathology and Royal Adelaide Hospital, Adelaide, South Australia, Australia.
Ian D LewisFaculty of Health Sciences, University of Adelaide, Adelaide, South Australia, Australia.
Richard J D'AndreaCentre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, South Australia, Australia.
Benjamin T KileThe Walter & Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia.
Anna L BrownCentre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, South Australia, Australia.
Hamish S ScottCentre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, South Australia, Australia.ORCID http://orcid.org/0000-0002-5813-631X
Christopher N HahnCentre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, South Australia, Australia.
Paula MarltonPrincess Alexandra Hospital and University of Queensland School of Clinical Medicine, Brisbane, Queensland, Australia.
Deqing PeiDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Cheng ChengDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Mignon L LohDepartment of Pediatrics, Benioff Children's Hospital, and the Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.
Benjamin L EbertDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Soheil MeshinchiFred Hutchinson Cancer Research Center, Seattle, WA, USA.
Torsten HaferlachMLL Munich Leukemia Laboratory, Munich, Germany.
Charles G MullighanDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA. charles.mullighan@stjude.org.ORCID http://orcid.org/0000-0002-1871-1850
St. Jude Children's Research Hospital · USSouth Australia Pathology · AUDana-Farber Cancer Institute · USFred Hutch Cancer Center · USMunich Leukemia Laboratory (Germany) · DENational Center For Child Health and Development · JPNational University of Singapore · SGUniversity of California, San Francisco · USAustralian Centre for HIV and Hepatitis Virology Research · AUBambino Gesù Children's Hospital · ITChildren's Hospital of Philadelphia · USThe Alfred Hospital · AUThe University of Adelaide · AUThe University of Queensland · AUUniversity of Padua · ITWalter and Eliza Hall Institute of Medical Research · AU

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
TYROSINE KINASE ONCOGENESIS IN MYELOID LEUKEMIAP01CA066996 · NCI · DANA-FARBER CANCER INSTITUTE · PI SCOTT A ARMSTRONG · 1996 to 2026
$52.5M
Leveraging innovative technologies in basic and clinical cancer researchT32CA009302 · NCI · STANFORD UNIVERSITY · PI LAURA D ATTARDI, Aaron M Newman · 1985 to 2026
$19.1M
Translating genomic discoveries to improved outcomes for high risk acute leukemiaR35CA197695 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Charles G Mullighan · 2017 to 2026
$11.4M
PROFESSIONAL ONCOLOGY EDUCATION PROGRAMR25CA023944 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SUZANNE A. GRONEMEYER · 1986 to 2026
$8.3M
Research Training in Childhood CancerT32CA128583 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Eric Alejandro Sweet-Cordero · 2007 to 2026
$6.0M
NCI NIH HHS P01 CA066996NCI NIH HHS P30 CA021765NCI NIH HHS R25 CA023944NCI NIH HHS R35 CA197695NCI NIH HHS T32 CA009302NCI NIH HHS T32 CA128583
6 · The paper itself

Abstract

Acute erythroid leukemia (AEL) is a high-risk leukemia of poorly understood genetic basis, with controversy regarding diagnosis in the spectrum of myelodysplasia and myeloid leukemia. We compared genomic features of 159 childhood and adult AEL cases with non-AEL myeloid disorders and defined five age-related subgroups with distinct transcriptional profiles: adult, TP53 mutated; NPM1 mutated; KMT2A mutated/rearranged; adult, DDX41 mutated; and pediatric, NUP98 rearranged. Genomic features influenced outcome, with NPM1 mutations and HOXB9 overexpression being associated with a favorable prognosis and TP53, FLT3 or RB1 alterations associated with poor survival. Targetable signaling mutations were present in 45% of cases and included recurrent mutations of ALK and NTRK1, the latter of which drives erythroid leukemogenesis sensitive to TRK inhibition. This genomic landscape of AEL provides the framework for accurate diagnosis and risk stratification of this disease, and the rationale for testing targeted therapies in this high-risk leukemia.

Indexed as

AdolescentAdultChildChild, PreschoolFemalefms-Like Tyrosine Kinase 3GenomicsHomeodomain ProteinsHumansInfantInfant, NewbornLeukemia, Erythroblastic, AcuteMaleMutationMyeloid-Lymphoid Leukemia ProteinNuclear Proteinsfms-Like Tyrosine Kinase 3Homeodomain ProteinsMyeloid-Lymphoid Leukemia ProteinNPM1 protein, humanNuclear ProteinsNucleophosminTumor Suppressor Protein p53

Identifiers

PMID30926971
PMCPMC6828160
OpenAlexW2932573403

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.