Evidence map›Paper›PMID 30926872›Full record

ArticleScientific reports2019

A novel 3-hydroxypropionic acid-inducible promoter regulated by the LysR-type transcriptional activator protein MmsR of Pseudomonas denitrificans.

Nam Hoai Nguyen, Satish Kumar Ainala, Shengfang Zhou, Sunghoon Park

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Nam Hoai NguyenSchool of Chemical and Biomolecular Engineering, Pusan National University, Busan, 46241, Republic of Korea.
Satish Kumar AinalaSchool of Energy and Chemical Engineering, UNIST, UNIST-gil 50, Ulsan, 44919, Republic of Korea.
Shengfang ZhouKey Laboratory of Biotechnology for Medicinal Plant, School of Life Sciences, Jiangsu Normal University, Xuzhou City, 221116, China.
Sunghoon ParkSchool of Chemical and Biomolecular Engineering, Pusan National University, Busan, 46241, Republic of Korea. parksh@unist.ac.kr.
Ulsan National Institute of Science and Technology · KRJiangsu Normal University · CNPusan National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MmsR (33.3 kDa) is a putative LysR-type transcriptional activator of Pseudomonas denitrificans. With the help of 3-hydroxypropionic acid (3-HP), an important platform chemical, MmsR positively regulates the expression of mmsA, which encodes methylmalonylsemialdehyde dehydrogenase, the enzyme involved in valine degradation. In the present study, the cellular function of MmsR and its binding to the regulatory DNA sequence of mmsA expression were investigated both in vivo and in vitro. Transcription of the mmsA was enhanced >140-fold in the presence of 3-HP. In the MmsR-responsive promoter region, two operators showing dyad symmetry, designated O

Indexed as

Promoter Regions, GeneticBacterial ProteinsGene Expression Regulation, BacterialLactic AcidModels, BiologicalOperonPseudomonasTranscriptional ActivationTranscription FactorsBacterial Proteinshydracrylic acidLactic AcidLrhA protein, bacteriaTranscription Factors

Identifiers

PMID30926872
PMCPMC6441110
OpenAlexW2928846515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.