Evidence map›Paper›PMID 30926857›Full record

ArticleScientific reports2019

pH-induced morphological changes of proteinaceous viral shells.

D Roshal, O Konevtsova, A Lošdorfer Božič, R Podgornik, S Rochal

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 4 countries.

D RoshalPhysics Faculty, Southern Federal University, Rostov-on-Don, Russia.ORCID http://orcid.org/0000-0003-0145-5018
O KonevtsovaPhysics Faculty, Southern Federal University, Rostov-on-Don, Russia.
A Lošdorfer BožičDepartment of Theoretical Physics, Jožef Stefan Institute, SI-1000, Ljubljana, Slovenia.ORCID http://orcid.org/0000-0001-6304-6637
R PodgornikDepartment of Theoretical Physics, Jožef Stefan Institute, SI-1000, Ljubljana, Slovenia. podgornikrudolf@ucas.ac.cn.
S RochalPhysics Faculty, Southern Federal University, Rostov-on-Don, Russia.ORCID http://orcid.org/0000-0001-6135-0440
Southern Federal University · RUJožef Stefan Institute · SIUniversity of Ljubljana · SI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changes in environmental pH can induce morphological changes in empty proteinaceous shells of bacteriophages in vitro that are very similar to changes occurring in viral capsids in vivo after encapsidation of DNA. These changes in capsid shape and size cannot be explained with a simple elastic model alone. We propose a new theoretical framework that combines the elasticity of thin icosahedral shells with the pH dependence of capsid charge distribution. Minimization of the sum of elastic and electrostatic free energies leads to equilibrium shapes of viral shells that depend on a single elastic parameter and the detailed configuration of the imbedded protein charges. Based on the in vitro shell reconstructions of bacteriophage HK97 we elucidate the details of how the reversible transition between Prohead II and Expansion Intermediate II states of the HK97 procapsid is induced by pH changes, as well as some other features of the bacteriophage maturation.

Indexed as

CapsidHydrogen-Ion ConcentrationModels, TheoreticalVirionAlgorithmsBacteriophages

Identifiers

PMID30926857
PMCPMC6440952
OpenAlexW2926505747

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.