Evidence map›Paper›PMID 30926795›Full record

ArticleNature communications2019

USP32 regulates late endosomal transport and recycling through deubiquitylation of Rab7.

Aysegul Sapmaz, Ilana Berlin, Erik Bos, Ruud H Wijdeven, Hans Janssen, Rebecca Konietzny, Jimmy J Akkermans, Ayse E Erson-Bensan, Roman I Koning, Benedikt M Kessler and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 85 citations in OpenAlex.

  1. Deubiquitination of Vangl by USP6 and USP32 Regulates Planar Cell Polarity Signaling.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Targeting ubiquitination in disease and therapy.Signal transduction and targeted therapy · 2025
    Review
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  7. Article
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  18. Review
  19. Article
  20. Spatial Mechano-Signaling Regulation of GTPases through Non-Degradative Ubiquitination.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Aysegul SapmazDivision of Cell Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, Netherlands.
Ilana BerlinDivision of Cell Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, Netherlands.
Erik BosDepartment of Cell and Chemical Biology, Leiden University Medical Center, Einthovenweg 20, 2333 ZC, Leiden, Netherlands.
Ruud H WijdevenDivision of Cell Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, Netherlands.
Hans JanssenDivision of Cell Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, Netherlands.
Rebecca KonietznyTarget Discovery Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Headington, Oxford, OX3 7FZ, UK.
Jimmy J AkkermansOncode Institute, Department of Cell and Chemical Biology, Leiden University Medical Center, Einthovenweg 20, 2333 ZC, Leiden, Netherlands.
Ayse E Erson-BensanDepartment of Biological Sciences, Middle East Technical University, Universiteler Mah. Dumlupınar Bulvarı 1, 06800, Çankaya, Ankara, Turkey.ORCID http://orcid.org/0000-0001-7398-9313
Roman I KoningDepartment of Cell and Chemical Biology, Leiden University Medical Center, Einthovenweg 20, 2333 ZC, Leiden, Netherlands.ORCID http://orcid.org/0000-0001-6736-7147
Benedikt M KesslerTarget Discovery Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Headington, Oxford, OX3 7FZ, UK.ORCID http://orcid.org/0000-0002-8160-2446
Jacques NeefjesDivision of Cell Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, Netherlands. J.J.C.Neefjes@lumc.nl.
Huib OvaaDivision of Cell Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX, Amsterdam, Netherlands. H.Ovaa@lumc.nl.
Leiden University Medical Center · NLUniversity of Oxford · GBMiddle East Technical University · TRThe Netherlands Cancer Institute · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The endosomal system is a highly dynamic multifunctional organelle, whose complexity is regulated in part by reversible ubiquitylation. Despite the wide-ranging influence of ubiquitin in endosomal processes, relatively few enzymes utilizing ubiquitin have been described to control endosome integrity and function. Here we reveal the deubiquitylating enzyme (DUB) ubiquitin-specific protease 32 (USP32) as a powerful player in this context. Loss of USP32 inhibits late endosome (LE) transport and recycling of LE cargos, resulting in dispersion and swelling of the late compartment. Using SILAC-based ubiquitome profiling we identify the small GTPase Rab7-the logistical centerpiece of LE biology-as a substrate of USP32. Mechanistic studies reveal that LE transport effector RILP prefers ubiquitylation-deficient Rab7, while retromer-mediated LE recycling benefits from an intact cycle of Rab7 ubiquitylation. Collectively, our observations suggest that reversible ubiquitylation helps switch Rab7 between its various functions, thereby maintaining global spatiotemporal order in the endosomal system.

Indexed as

EndocytosisUbiquitinationBiocatalysisCell Line, TumorEndosomesHumansLysosomesMembrane ProteinsModels, BiologicalProtein TransportProteolysisrab7 GTP-Binding Proteinsrab GTP-Binding ProteinsSubstrate SpecificityUbiquitin ThiolesteraseMembrane Proteinsrab7 GTP-Binding Proteinsrab7 GTP-binding proteins, humanrab GTP-Binding ProteinsUbiquitin ThiolesteraseUSP10 protein, human

Identifiers

PMID30926795
PMCPMC6440979
OpenAlexW2934913364

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.