Evidence map›Paper›PMID 30926791›Full record

ArticleNature communications2019

PiggyBac transposon tools for recessive screening identify B-cell lymphoma drivers in mice.

Julia Weber, Jorge de la Rosa, Carolyn S Grove, Markus Schick, Lena Rad, Olga Baranov, Alexander Strong, Anja Pfaus, Mathias J Friedrich, Thomas Engleitner and 31 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Genes · 2026
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  5. Advances in CRISPR-Cas9 in lineage tracing of model animals.Animal models and experimental medicine · 2025
    Review
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  13. Article
  14. Article
  15. Cell genomics · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 12 institutions in 8 countries.

Julia WeberInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Jorge de la RosaThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0002-0201-2078
Carolyn S GroveThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Markus SchickDepartment of Medicine III, Klinikum rechts der Isar, Technische Universität München, Munich, 81675, Germany.
Lena RadThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Olga BaranovInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Alexander StrongThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Anja PfausInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Mathias J FriedrichInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Thomas EngleitnerInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Robert LerschInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.ORCID http://orcid.org/0000-0001-7337-8627
Rupert ÖllingerInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Michael GrauDepartment of Medicine A, University Hospital Münster, Münster, 48149, Germany.
Irene Gonzalez MenendezInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, Tübingen, 72076, Germany.
Manuela MartellaInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, Tübingen, 72076, Germany.
Ursula KohlhoferInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, Tübingen, 72076, Germany.
Ruby BanerjeeThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Maria A TurchaninovaLaboratory of Genomics of Antitumor Adaptive Immunity, Privolzhsky Research Medical University, Nizhny Novgorod, 603005, Russia.
Anna SchergerDepartment of Medicine III, Klinikum rechts der Isar, Technische Universität München, Munich, 81675, Germany.
Gary J HoffmanThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Julia HessHelmholtz Zentrum München, Research Unit Radiation Cytogenetics, Neuherberg, 85764, Germany.
Laura B KuhnHelmholtz Zentrum München, Research Unit Gene Vectors, Munich, 81377, Germany.
Tim AmmonCenter for Translational Cancer Research (TranslaTUM), TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Johnny KimDepartment of Cardiac Development and Remodeling, Max-Planck-Institute for Heart and Lung Research, Bad Nauheim, 61231, Germany.
Günter SchneiderDepartment of Medicine II, Klinikum rechts der Isar, Technische Universität München, Munich, 81675, Germany.
Kristian UngerHelmholtz Zentrum München, Research Unit Radiation Cytogenetics, Neuherberg, 85764, Germany.
Ursula Zimber-StroblHelmholtz Zentrum München, Research Unit Gene Vectors, Munich, 81377, Germany.
Mathias HeikenwälderDivison of Chronic Inflammation and Cancer, German Cancer Research Center (DKFZ), Heidelberg, 69120, Germany.ORCID http://orcid.org/0000-0002-3135-2274
Marc Schmidt-SupprianCenter for Translational Cancer Research (TranslaTUM), TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Fengtang YangThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0002-3573-2354
Dieter SaurCenter for Translational Cancer Research (TranslaTUM), TUM School of Medicine, Technische Universität München, Munich, 81675, Germany.
Pentao LiuThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Katja SteigerComparative Experimental Pathology, Technische Universität München, Munich, 81675, Germany.ORCID http://orcid.org/0000-0002-7269-5433
Dmitriy M ChudakovLaboratory of Genomics of Antitumor Adaptive Immunity, Privolzhsky Research Medical University, Nizhny Novgorod, 603005, Russia.
Georg LenzDepartment of Medicine A, University Hospital Münster, Münster, 48149, Germany.
Leticia Quintanilla-MartinezInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, Tübingen, 72076, Germany.
Ulrich KellerDepartment of Medicine III, Klinikum rechts der Isar, Technische Universität München, Munich, 81675, Germany.
George S VassiliouThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0003-4337-8022
Juan CadiñanosInstituto de Medicina Oncológica y Molecular de Asturias (IMOMA), Oviedo, 33193, Spain.ORCID http://orcid.org/0000-0001-7561-7759
Allan BradleyThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Roland RadInstitute of Molecular Oncology and Functional Genomics, TUM School of Medicine, Technische Universität München, Munich, 81675, Germany. Roland.Rad@tum.de.
Wellcome Sanger Institute · GBTechnical University of Munich · DETUM Klinikum · DEHelmholtz Zentrum München · DEUniversity of Tübingen · DEGerman Cancer Research Center · DEBlackberry (United States) · USPrivolzhsky Research Medical University · RUThe University of Western Australia · AUMax Planck Institute for Heart and Lung Research · DEUniversidad de Oviedo · ESWellcome/MRC Cambridge Stem Cell Institute · GB

Funding

Cancer Research UK 23015Medical Research Council MC_PC_12009
6 · The paper itself

Abstract

B-cell lymphoma (BCL) is the most common hematologic malignancy. While sequencing studies gave insights into BCL genetics, identification of non-mutated cancer genes remains challenging. Here, we describe PiggyBac transposon tools and mouse models for recessive screening and show their application to study clonal B-cell lymphomagenesis. In a genome-wide screen, we discover BCL genes related to diverse molecular processes, including signaling, transcriptional regulation, chromatin regulation, or RNA metabolism. Cross-species analyses show the efficiency of the screen to pinpoint human cancer drivers altered by non-genetic mechanisms, including clinically relevant genes dysregulated epigenetically, transcriptionally, or post-transcriptionally in human BCL. We also describe a CRISPR/Cas9-based in vivo platform for BCL functional genomics, and validate discovered genes, such as Rfx7, a transcription factor, and Phip, a chromatin regulator, which suppress lymphomagenesis in mice. Our study gives comprehensive insights into the molecular landscapes of BCL and underlines the power of genome-scale screening to inform biology.

Indexed as

AnimalsClone CellsCRISPR-Cas SystemsDNA Transposable ElementsGene DosageGene Expression Regulation, NeoplasticGenes, NeoplasmGenes, Tumor SuppressorGenetic Association StudiesGenetic TestingHumansLoss of HeterozygosityLymphoma, B-CellMice, Inbred C57BLMice, TransgenicReceptors, Antigen, B-CellDNA Transposable ElementsReceptors, Antigen, B-Cell

Identifiers

PMID30926791
PMCPMC6440946
OpenAlexW2933195911

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.