Evidence map›Paper›PMID 30926639›Full record

ArticleMolecular cancer therapeutics2019

Prospective Clinical Sequencing of Adult Glioma.

Siyuan Zheng, Kristin Alfaro-Munoz, Wei Wei, Xiaojing Wang, Fang Wang, Agda Karina Eterovic, Kenna R Mills Shaw, Funda Meric-Bernstam, Gregory N Fuller, Ken Chen and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Signaling pathways in brain tumors and therapeutic interventions.Signal transduction and targeted therapy · 2023
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Association ofCells · 2021
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Siyuan ZhengDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas. zhengs3@uthscsa.edu jdegroot@mdanderson.org.ORCID 0000-0002-1031-9424
Kristin Alfaro-MunozDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Wei WeiDepartment of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Xiaojing WangDepartment of Epidemiology and Biostatistics, Greehey Children's Cancer Research Institute, The University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Fang WangDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Agda Karina EterovicInstitute of Personalized Cancer Therapy, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Kenna R Mills ShawInstitute of Personalized Cancer Therapy, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Funda Meric-BernstamInstitute of Personalized Cancer Therapy, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Gregory N FullerDepartment of Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0001-9447-2647
Ken ChenDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0003-4013-5279
Roel G VerhaakDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Gordon B MillsInstitute of Personalized Cancer Therapy, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0002-0144-9614
W K Alfred YungDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Shiao-Pei WeathersDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
John F de GrootDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas. zhengs3@uthscsa.edu jdegroot@mdanderson.org.
The University of Texas MD Anderson Cancer Center · USThe University of Texas Health Science Center at San Antonio · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Tropism Enhanced Oncolytic Adenovirus for the Treatment of Brain TumorsP50CA127001 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Juan Fueyo · 2008 to 2026
$41.2M
Integrative bioinformatics and functional characterization of oncogenic driver aberrations in cancerU01CA217842 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DENEEN, BENJAMIN, MILLS, GORDON B. · 2017 to 2021
$3.6M
NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA127001NCI NIH HHS U01 CA217842
6 · The paper itself

Abstract

Malignant gliomas are a group of intracranial cancers associated with disproportionately high mortality and morbidity. Here, we report ultradeep targeted sequencing of a prospective cohort of 237 tumors from 234 patients consisting of both glioblastoma (GBM) and lower-grade glioma (LGG) using our customized gene panels. We identified 2,485 somatic mutations, including single-nucleotide substitutions and small indels, using a validated in-house protocol. Sixty-one percent of the mutations were contributed by 12 hypermutators. The hypermutators were enriched for recurrent tumors and had comparable outcome, and most were associated with temozolomide exposure.

Indexed as

High-Throughput Nucleotide SequencingPrognosisAdultAgedCell Line, TumorFemaleGenome, HumanGlioblastomaGliomaHumansIsocitrate DehydrogenaseMaleMiddle AgedMolecular Sequence AnnotationMutationNeoplasm GradingIsocitrate Dehydrogenase

Identifiers

PMID30926639
PMCPMC6497568
OpenAlexW2933896469

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.