Evidence map›Paper›PMID 30925779›Full record

ArticleCancers2019

Integrated Somatic and Germline Whole-Exome Sequencing Analysis in Women with Lung Cancer after a Previous Breast Cancer.

Simona Coco, Silvia Bonfiglio, Davide Cittaro, Irene Vanni, Marco Mora, Carlo Genova, Maria Giovanna Dal Bello, Simona Boccardo, Angela Alama, Erika Rijavec and 10 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 1 country.

Simona CocoLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. simona.coco@hsanmartino.it.
Silvia BonfiglioCentre for Translational Genomics and Bioinformatics, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy. bonfiglio.silvia@hsr.it.
Davide CittaroCentre for Translational Genomics and Bioinformatics, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy. cittaro.davide@hsr.it.ORCID 0000-0003-0384-3700
Irene VanniLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. irenevanni85@yahoo.it.
Marco MoraDepartment of Pathology, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. marco.mora@hsanmartino.it.
Carlo GenovaLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. carlo.genova1985@gmail.com.ORCID 0000-0003-3690-8582
Maria Giovanna Dal BelloLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. mariagiovanna.dalbello@hsanmartino.it.ORCID 0000-0002-4952-1873
Simona BoccardoLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. simona.boccardo@hsanmartino.it.
Angela AlamaLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. angela.alama@hsanmartino.it.
Erika RijavecLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. ery80x@yahoo.it.
Claudio SiniLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. audiosini@tiscali.it.
Valeria RossellaSwiss Stem Cell Biotech, 6830 Vacallo, Switzerland. valeria.rossella@stembiotech.ch.
Giulia BarlettaLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. giulia.barletta@yahoo.it.
Federica BielloLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. febiello@gmail.com.
Anna TruiniLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. anna.truini@gmail.com.
Cristina BruzzoLung Cancer Unit, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. cristina.bruzzo@hsanmartino.it.
Maurizio GalloDepartment of Internal Medicine and Medical Specialties (DIMI), University of Genoa, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. maurizio.gallo@unige.it.
Dejan LazarevicCentre for Translational Genomics and Bioinformatics, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy. lazarevic.dejan@hsr.it.ORCID 0000-0003-4527-290X
Alberto BallestreroDepartment of Internal Medicine and Medical Specialties (DIMI), University of Genoa, IRCCS Ospedale Policlinico San Martino, 16132 Genoa, Italy. aballestrero@unige.it.
Francesco GrossiUOC Oncologia Medica Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy. francesco.grossi@policlinico.mi.it.
Ospedale Policlinico San Martino · ITVita-Salute San Raffaele University · ITFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · IT

Funding

Italian Ministry of Health GR 2011-12; 02350922
6 · The paper itself

Abstract

Women treated for breast cancer (BC) are at risk of developing secondary tumors, such as lung cancer (LC). Since rare germline variants have been linked to multiple cancer development, we hypothesized that BC survivors might be prone to develop LC as a result of harboring rare variants. Sixty patients with LC with previous BC (the study population; SP) and 53 women with either BC or LC and no secondary cancer (control population; CP) were enrolled. Whole exome sequencing was performed in both tumors and unaffected tissues from 28/60 SP patients, and in germline DNA from 32/53 CP. Candidate genes were validated in the remaining individuals from both populations. We found two main mutational signature profiles: S1 (C>T) in all BCs and 16/28 LCs, and S2 (C>A) which is strongly associated with smoking, in 12/28 LCs. The burden test over rare germline variants in S1-LC vs CP identified 248 genes. Validation confirmed

Indexed as

breast cancerexome sequencinggenetic predispositionlung cancermultiple cancer susceptibility

Identifiers

PMID30925779
PMCPMC6520745
OpenAlexW2924093839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.