Evidence map›Paper›PMID 30924304›Full record

ArticleCytoskeleton (Hoboken, N.J.)2019

A homozygous genome-edited Sept2-EGFP fibroblast cell line.

Monika Banko, Iwona Mucha-Kruczynska, Christoph Weise, Florian Heyd, Helge Ewers

Open access · hybridAbstract read
In one paragraph

Article in Cytoskeleton (Hoboken, N.J.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Local PI(4,5)PNature communications · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Monika BankoRandall Division of Cell and Molecular Biophysics, King's College London, London, UK.
Iwona Mucha-KruczynskaRandall Division of Cell and Molecular Biophysics, King's College London, London, UK.
Christoph WeiseDepartment of Biology, Chemistry and Pharmacy, Freie Universität Berlin, Berlin, Germany.
Florian HeydDepartment of Biology, Chemistry and Pharmacy, Freie Universität Berlin, Berlin, Germany.
Helge EwersRandall Division of Cell and Molecular Biophysics, King's College London, London, UK.ORCID 0000-0003-3948-4332
King's College London · GBFreie Universität Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Septins are a conserved, essential family of GTPases that interact with actin, microtubules, and membranes and form scaffolds and diffusion barriers in cells. Several of the 13 known mammalian septins assemble into nonpolar, multimeric complexes that can further polymerize into filamentous structures. While some GFP-coupled septins have been described, overexpression of GFP-tagged septins often leads to artifacts in localization and function. To overcome this ubiquitous problem, we have here generated a genome-edited rat fibroblast cell line expressing Septin 2 (Sept2) coupled to enhanced green fluorescent protein (EGFP) from both chromosomal loci. We characterize these cells by genomic polymerase chain reaction (PCR) for genomic integration, by western blot and reverse transcriptase-PCR for expression, by immunofluorescence and immunoprecipitation for the colocalization of septins with one another and cellular structures and for complex formation of different septins. By live cell imaging, proliferation and migration assays we investigate proper function of septins in these cells. We find that EGFP is incorporated into both chromosomal loci and only EGFP-coupled Sept2 is expressed in homozygous cells. We find that endogenous Sept2-EGFP exhibits expression levels, localization and incorporation into cellular septin complexes similar to the wt in these cells. The expression level of other septins is not perturbed and cell division and cell migration proceed normally. We expect our cell line to be a useful tool for the cell biology of septins, especially for quantitative biology.

Indexed as

ActinsAnimalsCell LineFluorescent Antibody TechniqueGreen Fluorescent ProteinsImmunoprecipitationPolymerase Chain ReactionRatsSeptinsTranscription Activator-Like Effector NucleasesActinsenhanced green fluorescent proteinGreen Fluorescent ProteinsSeptinsTranscription Activator-Like Effector Nucleasesgenome editingseptinTALEN

Identifiers

PMID30924304
PMCPMC6593442
OpenAlexW2949130531

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.