Evidence map›Paper›PMID 30923136›Full record

ArticleG3 (Bethesda, Md.)2019

The Whole Genome Sequence and mRNA Transcriptome of the Tropical Cyclopoid Copepod

Tue Sparholt Jørgensen, Bolette Lykke Holm Nielsen, Bent Petersen, Patrick Denis Browne, Benni Winding Hansen, Lars Hestbjerg Hansen

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in G3 (Bethesda, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Tue Sparholt JørgensenDepartment of Science and Environment, Roskilde University, Roskilde, Denmark, 4000 tuesparholt@gmail.com lhha@envs.au.dk.ORCID 0000-0002-2437-7086
Bolette Lykke Holm NielsenDepartment of Science and Environment, Roskilde University, Roskilde, Denmark, 4000.ORCID 0000-0002-8944-5879
Bent PetersenNatural History Museum of Denmark, University of Copenhagen, Denmark, 2100.ORCID 0000-0002-2472-8317
Patrick Denis BrowneDepartment of Environmental Science - Environmental Microbiology and Biotechnology, Aarhus University, Roskilde, Denmark, 4000.ORCID 0000-0001-8300-7758
Benni Winding HansenDepartment of Science and Environment, Roskilde University, Roskilde, Denmark, 4000.ORCID 0000-0003-1145-561X
Lars Hestbjerg HansenDepartment of Environmental Science - Environmental Microbiology and Biotechnology, Aarhus University, Roskilde, Denmark, 4000.
Aarhus University · DKRoskilde University · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Copepoda is one of the most ecologically important animal groups on Earth, yet very few genetic resources are available for this Subclass. Here, we present the first whole genome sequence (WGS, acc. UYDY01) and the first mRNA transcriptome assembly (TSA, Acc. GHAJ01) for the tropical cyclopoid copepod species

Indexed as

TranscriptomeWhole Genome SequencingAnimalsComputational BiologyCopepodaGenomeGenomicsPhylogenyRNA, MessengerRNA, MessengerApocyclops royiArthropodaCopepod genome assemblyCopepod transcriptome assemblycrustacean genomicsCyclopoida

Identifiers

PMID30923136
PMCPMC6505139
OpenAlexW2950477460

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.