Evidence map›Paper›PMID 30923056›Full record

ArticleDevelopment (Cambridge, England)2019

A gene expression atlas of embryonic neurogenesis in

Alexandra L McCorkindale, Philipp Wahle, Sascha Werner, Irwin Jungreis, Peter Menzel, Chinmay J Shukla, Rúben Lopes Pereira Abreu, Rafael A Irizarry, Irmtraud M Meyer, Manolis Kellis and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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  4. Article
  5. Recent Advances and Future Potential of Long Non-Coding RNAs in Insects.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Long noncoding RNAs in neurodevelopment and Parkinson's disease.Animal models and experimental medicine · 2019
    Review
  14. Article
  15. Insights into the Functions of LncRNAs inInternational journal of molecular sciences · 2019
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Alexandra L McCorkindaleLaboratory for Systems Biology of Neural Tissue Differentiation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany ali.mccorkindale@inventia.life robert.zinzen@mdc-berlin.de.ORCID 0000-0002-0840-0784
Philipp WahleLaboratory for Systems Biology of Neural Tissue Differentiation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany.
Sascha WernerLaboratory for Systems Biology of Neural Tissue Differentiation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany.
Irwin JungreisMIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA 02139, USA.
Peter MenzelLaboratory for Bioinformatics of RNA Structure and Transcriptome Regulation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany.
Chinmay J ShuklaDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Rúben Lopes Pereira AbreuLaboratory for Systems Biology of Neural Tissue Differentiation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany.
Rafael A IrizarryDana Farber Cancer Institute, Boston, MA 02215, USA.
Irmtraud M MeyerLaboratory for Bioinformatics of RNA Structure and Transcriptome Regulation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany.
Manolis KellisBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Robert P ZinzenLaboratory for Systems Biology of Neural Tissue Differentiation, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrueck Centre for Molecular Medicine (MDC) in the Helmholtz Association, Robert-Roessle-Strasse 12, 13125 Berlin, Germany ali.mccorkindale@inventia.life robert.zinzen@mdc-berlin.de.ORCID 0000-0002-8638-5102
Max Delbrück Center · DEBroad Institute · USDana-Farber Cancer Institute · USHarvard University · USUniversity of Colorado Boulder · US

Funding

GENCODE Resource ProjectU41HG007234 · NHGRI · SANGER INSTITUTE · PI FLICEK, PAUL · 2013 to 2020
$20.3M
Regulatory Morif Discovery in the Human Genome Using Comparative GenomicsR01HG004037 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KELLIS, MANOLIS · 2007 to 2015
$3.9M
NHGRI NIH HHS R01 HG004037NHGRI NIH HHS U41 HG007234Wellcome Trust
6 · The paper itself

Abstract

Cell type specification during early nervous system development in

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCell LineageDrosophila melanogasterFlow CytometryGene Expression ProfilingGene Regulatory NetworksIn Situ Hybridization, FluorescenceNervous SystemNeurogenesisNeurogliaPhylogenyRNA, Long NoncodingTranscriptomeRNA, Long NoncodingDrosophila melanogasterEmbryogenesislncRNANeurogenesisSpatiotemporal transcriptome

Identifiers

PMID30923056
PMCPMC6451322
OpenAlexW2950828853

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.