Evidence map›Paper›PMID 30921383›Full record

ArticlePloS one2019

A medical records and data capture and management system for Lassa fever in Sierra Leone: Approach, implementation, and challenges.

Jeffrey G Shaffer, John S Schieffelin, Michael Gbakie, Foday Alhasan, Nicole B Roberts, Augustine Goba, Jessica Randazzo, Mambu Momoh, Troy D Moon, Lansana Kanneh and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Lassa Virus Genetics.Current topics in microbiology and immunology · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 2 countries.

Jeffrey G ShafferDepartment of Global Biostatistics and Data Science, School of Public Health and Tropical Medicine, Tulane University, New Orleans, Louisiana, United States of America.ORCID 0000-0002-3941-3772
John S SchieffelinDepartments of Pediatrics and Internal Medicine, Sections of Pediatric & Adult Infectious Diseases, School of Medicine, Tulane University, New Orleans, Louisiana, United States of America.
Michael GbakieViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Foday AlhasanViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Nicole B RobertsDepartment of Microbiology and Immunology, Tulane University, New Orleans, Louisiana, United States of America.
Augustine GobaViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Jessica RandazzoDepartment of Global Biostatistics and Data Science, School of Public Health and Tropical Medicine, Tulane University, New Orleans, Louisiana, United States of America.
Mambu MomohViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Troy D MoonVanderbilt University Institute for Global Health, Nashville, Tennessee, United States of America.
Lansana KannehViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Danielle C LevyDepartment of Microbiology and Immunology, Tulane University, New Orleans, Louisiana, United States of America.
Rachel M PodgorskiDepartment of Microbiology and Immunology, Tulane University, New Orleans, Louisiana, United States of America.ORCID 0000-0003-1467-0921
Jessica N HartnettDepartment of Microbiology and Immunology, Tulane University, New Orleans, Louisiana, United States of America.
Matt L BoisenZalgen Labs, LLC, Germantown, Maryland, United States of America.
Luis M BrancoZalgen Labs, LLC, Germantown, Maryland, United States of America.
Robert SamuelsViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Donald S GrantViral Hemorrhagic Fever Program, Kenema Government Hospital, Kenema, Sierra Leone.
Robert F GarryDepartment of Microbiology and Immunology, Tulane University, New Orleans, Louisiana, United States of America.
Viral Hemorrhagic Fever Consortium
Tulane University · USUniversity of Sierra Leone · SLZalgen (United States) · USVanderbilt University · US

Funding

Technology CoreU19AI135995 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI Kristian Graugaard Andersen · 2018 to 2026
$32.0M
UJMT – ORWH – Gazzetta, Issa-BoubeD43TW009340 · FIC · UNIV OF NORTH CAROLINA CHAPEL HILL · PI William Checkley, Benjamin H. Chi · 2017 to 2026
$14.8M
Preclinical development of recombinant antigen diagnostics for Lassa feverU01AI082119 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI GARRY, ROBERT F · 2009 to 2013
$6.7M
Mentoring Translational Researchers in LouisianaP20GM103501 · NIGMS · LSU HEALTH SCIENCES CENTER · PI OCHOA, AUGUSTO C. · 2012 to 2014
$6.3M
Antibody immunotherapeutics for biodefense against Lassa virusR01AI104621 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI GARRY, ROBERT F · 2013 to 2017
$5.8M
Recombinant antigen assays for Lassa and other arenaviruUC1AI067188 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI GARRY, ROBERT F · 2005 to 2005
$3.9M
Project 2. Expansion of Clinical Research Capacity at Kenema Government HospitalU19AI115589 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI SCHIEFFELIN, JOHN SCRIBNER · 2015 to 2019
$3.6M
Opening a New Lassa Fever Ward in Kenema Sierra LeoneR13AI104216 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI GARRY, ROBERT F · 2013 to 2013
$8k
FIC NIH HHS D43 TW009340NIAID NIH HHS HHSN272200900018CNIAID NIH HHS HHSN272200900049CNIAID NIH HHS HHSN272201000022CNIAID NIH HHS R01 AI104621NIAID NIH HHS R13 AI104216NIAID NIH HHS U01 AI082119NIAID NIH HHS U19 AI115589NIAID NIH HHS U19 AI135995NIAID NIH HHS UC1 AI067188NIGMS NIH HHS P20 GM103501
6 · The paper itself

Abstract

Situated in southeastern Sierra Leone, Kenema Government Hospital (KGH) maintains one of the world's only Lassa fever isolation wards and was a strategic Ebola virus disease (EVD) treatment facility during the 2014 EVD outbreak. Since 2006, the Viral Hemorrhagic Fever Consortium (VHFC) has carried out research activities at KGH, capturing clinical and laboratory data for suspected cases of Lassa fever. Here we describe the approach, progress, and challenges in designing and maintaining a data capture and management system (DCMS) at KGH to assist infectious disease researchers in building and sustaining DCMS in low-resource environments. Results on screening patterns and case-fatality rates are provided to illustrate the context and scope of the DCMS covered in this study. A medical records system and DCMS was designed and implemented between 2010 and 2016 linking historical and prospective Lassa fever data sources across KGH Lassa fever units and its peripheral health units. Data were captured using a case report form (CRF) system, enzyme-linked immunosorbent assay (ELISA) plate readers, polymerase chain reaction (PCR) machines, blood chemistry analyzers, and data auditing procedures. Between 2008 and 2016, blood samples for 4,229 suspected Lassa fever cases were screened at KGH, ranging from 219 samples in 2008 to a peak of 760 samples in 2011. Lassa fever case-fatality rates before and following the Ebola outbreak were 65.5% (148/226) and 89.5% (17/19), respectively, suggesting that fewer, but more seriously ill subjects with Lassa fever presented to KGH following the 2014 EVD outbreak (p = .040). DCMS challenges included weak specificity of the Lassa fever suspected case definition, limited capture of patient survival outcome data, internet costs, lapses in internet connectivity, low bandwidth, equipment and software maintenance, lack of computer teaching laboratories, and workload fluctuations due to variable screening activity. DCMS are the backbone of international research efforts and additional literature is needed on the topic for establishing benchmarks and driving goal-based approaches for its advancement in developing countries.

Indexed as

Databases, FactualAntibodies, ViralBlood Chemical AnalysisDisease OutbreaksHospitals, DistrictHumansInformation DisseminationLassa FeverLassa virusMedical RecordsRNA, ViralSierra LeoneSoftwareSurvival RateAntibodies, ViralRNA, Viral

Identifiers

PMID30921383
PMCPMC6438490
OpenAlexW2934712772

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.