Evidence map›Paper›PMID 30921382›Full record

ArticlePloS one2019

Cell transfection of purified cytolethal distending toxin B subunits allows comparing their nuclease activity while plasmid degradation assay does not.

Benoît J Pons, Elisabeth Bezine, Mélissa Hanique, Valérie Guillet, Lionel Mourey, Johana Chicher, Teresa Frisan, Julien Vignard, Gladys Mirey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functional Study ofToxins · 2020
    Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Benoît J PonsINRA, UMR1331, Toxalim, Research Centre in Food Toxicology, Toulouse, France.ORCID 0000-0002-9137-1047
Elisabeth BezineINRA, UMR1331, Toxalim, Research Centre in Food Toxicology, Toulouse, France.
Mélissa HaniqueINRA, UMR1331, Toxalim, Research Centre in Food Toxicology, Toulouse, France.
Valérie GuilletUniversité Toulouse III-Paul Sabatier (UPS), Toulouse, France.
Lionel MoureyUniversité Toulouse III-Paul Sabatier (UPS), Toulouse, France.
Johana ChicherPlateforme protéomique Strasbourg Esplanade, Institut de Biologie Moléculaire et Cellulaire (IBMC), FRC1589 Strasbourg, France.ORCID 0000-0002-4403-7484
Teresa FrisanDepartment of Cell and Molecular Biology, Karolinska Institute, Stockholm, Sweden.
Julien VignardINRA, UMR1331, Toxalim, Research Centre in Food Toxicology, Toulouse, France.
Gladys MireyINRA, UMR1331, Toxalim, Research Centre in Food Toxicology, Toulouse, France.ORCID 0000-0002-0095-1864
Centre National de la Recherche Scientifique · FRToxicologie Alimentaire · FRUniversité Toulouse III - Paul Sabatier · FRInstitut de Biologie Moléculaire et Cellulaire · FRInstitut National Polytechnique de Toulouse · FRKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Cytolethal Distending Toxin (CDT) is produced by many pathogenic bacteria. CDT is known to induce genomic DNA damage to host eukaryotic cells through its catalytic subunit, CdtB. CdtB is structurally homologous to DNase I and has a nuclease activity, dependent on several key residues. Yet some differences between various CdtB subunit activities, and discrepancies between biochemical and cellular data, have been observed. To better characterise the role of CdtB in the induction of DNA damage, we affinity-purified wild-type and mutants of CdtB, issued from E. coli and H. ducreyi, under native and denaturing conditions. We then compared their nuclease activity by a classic in vitro assay using plasmid DNA, and two different eukaryotic assays-the first assay where host cells were transfected with a plasmid encoding CdtB, the second assay where host cells were directly transfected with purified CdtB. We show here that in vitro nuclease activities are difficult to quantify, whereas CdtB activities in host cells can be easily interpreted and confirmed the loss of function of the catalytic mutant. Our results highlight the importance of performing multiple assays while studying the effects of bacterial genotoxins, and indicate that the classic in vitro assay should be complemented with cellular assays.

Indexed as

Bacterial ToxinsBiological AssayDNA DamageEscherichia coliHaemophilus ducreyiHeLa CellsHumansMutagenesisPlasmidsProtein SubunitsRecombinant ProteinsTransfectionBacterial Toxinscytolethal distending toxinProtein SubunitsRecombinant Proteins

Identifiers

PMID30921382
PMCPMC6438463
OpenAlexW2931898201

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.