Evidence map›Paper›PMID 30921348›Full record

ArticlePloS one2019

The mouse KLF1 Nan variant impairs nuclear condensation and erythroid maturation.

Ileana Cantú, Harmen J G van de Werken, Nynke Gillemans, Ralph Stadhouders, Steven Heshusius, Alex Maas, Fatemehsadat Esteghamat, Zeliha Ozgur, Wilfred F J van IJcken, Frank Grosveld and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Genome-Wide Analysis of theAnimals : an open access journal from MDPI · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Ileana CantúDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Harmen J G van de WerkenDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.ORCID 0000-0002-9794-1477
Nynke GillemansDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Ralph StadhoudersDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Steven HeshusiusDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Alex MaasDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Fatemehsadat EsteghamatDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Zeliha OzgurCenter for Biomics, Erasmus MC, Rotterdam, The Netherlands.
Wilfred F J van IJckenCenter for Biomics, Erasmus MC, Rotterdam, The Netherlands.
Frank GrosveldDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Marieke von LindernDepartment of Hematopoiesis, Sanquin Research, Amsterdam, The Netherlands.
Sjaak PhilipsenDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.ORCID 0000-0002-3690-1201
Thamar B van DijkDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Erasmus MC · NLSanquin · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Krüppel-like factor 1 (KLF1) is an essential transcription factor for erythroid development, as demonstrated by Klf1 knockout mice which die around E14 due to severe anemia. In humans, >140 KLF1 variants, causing different erythroid phenotypes, have been described. The KLF1 Nan variant, a single amino acid substitution (p.E339D) in the DNA binding domain, causes hemolytic anemia and is dominant over wildtype KLF1. Here we describe the effects of the KLF1 Nan variant during fetal development. We show that Nan embryos have defects in erythroid maturation. RNA-sequencing of the KLF1 Nan fetal liver cells revealed that Exportin 7 (Xpo7) was among the 782 deregulated genes. This nuclear exportin is implicated in terminal erythroid differentiation; in particular it is involved in nuclear condensation. Indeed, KLF1 Nan fetal liver cells had larger nuclei and reduced chromatin condensation. Knockdown of XPO7 in wildtype erythroid cells caused a similar phenotype. We propose that reduced expression of XPO7 is partially responsible for the erythroid defects observed in KLF1 Nan erythroid cells.

Indexed as

Amino Acid SubstitutionAnemia, HemolyticAnimalsCell DifferentiationCells, CulturedChromatinDisease Models, AnimalEmbryo, NonmammalianErythroid CellsErythropoiesisFemaleGene Expression Regulation, DevelopmentalKruppel-Like Transcription FactorsMaleMiceran GTP-Binding ProteinChromatinerythroid Kruppel-like factorKruppel-Like Transcription Factorsran GTP-Binding ProteinRanGTP-binding protein 16

Identifiers

PMID30921348
PMCPMC6438607
OpenAlexW2901001776

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.