Evidence map›Paper›PMID 30919583›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2019

OMIP-056: Evaluation of Human Conventional T Cells, Donor-Unrestricted T Cells, and NK Cells Including Memory Phenotype by Intracellular Cytokine Staining.

One Dintwe, Shamiska Rohith, Katharine V Schwedhelm, M Juliana McElrath, Erica Andersen-Nissen, Stephen C De Rosa

Erratum issuedOpen access · hybridAbstract readEvaluation Study
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

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  15. OMIP-070: NKp46-Based 27-Color Phenotyping to Define Natural Killer Cells Isolated From Human Tumor Tissues.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2020
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

One DintweCape Town HVTN Immunology Laboratory, Cape Town, South Africa.
Shamiska RohithCape Town HVTN Immunology Laboratory, Cape Town, South Africa.
Katharine V SchwedhelmVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, 98109.
M Juliana McElrathVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, 98109.
Erica Andersen-NissenCape Town HVTN Immunology Laboratory, Cape Town, South Africa.
Stephen C De RosaVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, 98109.
Cape Town Science Centre · ZAFred Hutch Cancer Center · USInfectious Disease Research Institute · USUniversity of Washington · US

Funding

LC: HIV Vaccine Trials NetworkUM1AI068618 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Margaret Juliana McElrath · 2011 to 2026
$483.6M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Kenneth Sherr · 1988 to 2026
$104.9M
NIAID NIH HHS P30 AI027757NIAID NIH HHS UM1 AI068618
6 · The paper itself

Abstract

A 26-color staining panel was developed to profile human antigen-specific T cells in an intracellular cytokine staining (ICS) assay using peptide pools to various antigens of interest. In addition to multiple functional markers, the panel includes differentiation/activation markers and markers to assess γδ, mucosal-associated invariant T, and NK T cells as well as conventional NK cells. Panel optimization was performed using previously cryopreserved PBMC from healthy adults, and then, expression of key functional markers in the panel was cross-validated against a validated ICS assay used in the HIV Vaccine Trials Network (HVTN). The panel is currently being used to evaluate the responses to tuberculosis and malaria vaccine candidates in volunteers from different geographic areas. © 2019 The Authors. Cytometry Part A published by Wiley Periodicals, Inc. on behalf of International Society for Advancement of Cytometry.

Indexed as

AdultAIDS VaccinesAntigensCytokinesFlow CytometryFluorescent DyesHumansImmunologic MemoryKiller Cells, NaturalLeukocytes, MononuclearMalaria VaccinesNatural Killer T-CellsT-LymphocytesTuberculosisAIDS VaccinesAntigensCytokinesFluorescent DyesMalaria Vaccinescytometryhuman PBMCintracellular cytokinesMAIT cellsmemoryNK cellsT cellsγδ T cells

Identifiers

PMID30919583
PMCPMC6663658
OpenAlexW4252544252

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.