ArticlePeerJ2019
Phytobiomes are compositionally nested from the ground up.
Article in PeerJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- Plant development influences dynamic shifts in the root compartment microbiomes of wild and domesticated finger millet cultivars.BMC microbiology · 2025Article
- Microbiome spatial scaling varies among members, hosts, and environments across model island ecosystems.The ISME journal · 2025Article
- Microbial composition and function are nested and shaped by food web topologies.ISME communications · 2025Article
- Invisible Inhabitants of Plants and a Sustainable Planet: Diversity of Bacterial Endophytes and their Potential in Sustainable Agriculture.Indian journal of microbiology · 2024Review
- Plant growth promoting bacteria (PGPB)-induced plant adaptations to stresses: an updated review.PeerJ · 2024Review
- Sources of Fungal Symbionts in the Microbiome of a Mobile Insect Host, Spodoptera frugiperda.Microbial ecology · 2023Article
- Aedes albopictus microbiome derives from environmental sources and partitions across distinct host tissues.MicrobiologyOpen · 2023Article
- Above- and below-ground microbiome in the annual developmental cycle of two olive tree varieties.FEMS microbes · 2023Article
- Impact of PhyllosphereMicrobiology spectrum · 2022Article
- A ridge-to-reef ecosystem microbial census reveals environmental reservoirs for animal and plant microbiomes.Proceedings of the National Academy of Sciences of the United States of America · 2022Article
- Photosynthetic microorganisms effectively contribute to bryophyte COISME communications · 2022Article
- Local Plants, Not Soils, Are the Primary Source of Foliar Fungal Community Assembly in a C4 Grass.Microbial ecology · 2022Article
- Ecological Dynamics and Microbial Treatments against Oomycete Plant Pathogens.Plants (Basel, Switzerland) · 2021Review
- Plant Compartments and Developmental Stages Modulate the Balance between Niche-Based and Neutral Processes in Soybean Microbiome.Microbial ecology · 2021Article
- Plant part and a steep environmental gradient predict plant microbial composition in a tropical watershed.The ISME journal · 2021Article
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Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
14 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plant-associated microbes are critical players in host health, fitness and productivity. Despite microbes' importance in plants, seeds are mostly sterile, and most plant microbes are recruited from an environmental pool. Surprisingly little is known about the processes that govern how environmental microbes assemble on plants in nature. In this study we examine how bacteria are distributed across plant parts, and how these distributions interact with spatial gradients. We sequenced amplicons of bacteria from the surfaces of six plant parts and adjacent soil of
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.