ArticleThe EMBO journal2019
The long noncoding RNA
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In one paragraph
Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.
0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.8field-weighted citation impact, top 3% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
61 citing papers in PubMed, 90 citations in OpenAlex.
- ceRNA Network Dynamics in Inflammatory Bowel Disease: The LncRNA-miRNA-mRNA Axis in Intestinal Homeostasis and Inflammation.Cell biochemistry and biophysics · 2026Review
- MIR210HG promotes the progression of pediatric pneumonia by inducing apoptosis and inflammation through downregulating miR-195-5p and upregulating FGF2.BMC pediatrics · 2026Article
- Distinct lipid transport proteins are regulated by innate immune stimuli.Discovery immunology · 2026Article
- Investigation of CNS damage following HIV infection and methamphetamine exposure using human iPSC-derived microglia and 3D cerebral assembloid models.bioRxiv : the preprint server for biology · 2025Article
- CYP1B1-AS1 regulates CYP1B1 to promote Coxiella burnetii pathogenesis by inhibiting ROS and host cell death.Nature communications · 2025Article
- Pattern recognition receptors: function, regulation and therapeutic potential.Signal transduction and targeted therapy · 2025Review
- A searchable atlas of pathogen-sensitive lncRNA networks in human macrophages.Nature communications · 2025Article
- Catalogue of LPS-induced transcriptional changes across vertebrates identifies syntenically conserved human long non-coding RNAs that regulate the innate immune response.Frontiers in immunology · 2025Article
- The emerging role of exosomal LncRNAs in chronic fatigue syndrome: from intercellular communication to disease biomarkers.Frontiers in molecular biosciences · 2025Review
- OvineAnimals : an open access journal from MDPI · 2024Article
- Ulcerative colitis: molecular insights and intervention therapy.Molecular biomedicine · 2024Review
- Long Non-Coding RNAs and Their Potential Role as Biomarkers in Inflammatory Bowel Disease.International journal of molecular sciences · 2024Review
- Analyzing bacterial persistence and dormancy: A bibliometric exploration of 21st century scientific literature.Saudi journal of biological sciences · 2024Article
- The Killer's Web: Interconnection between Inflammation, Epigenetics and Nutrition in Cancer.International journal of molecular sciences · 2024Review
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- Long Non-Coding RNAs and Their "Discrete" Contribution to IBD and Johne's Disease-What Stands out in the Current Picture? A Comprehensive Review.International journal of molecular sciences · 2023Review
- LINC01268 promotes epithelial-mesenchymal transition, invasion and metastasis of gastric cancerWorld journal of gastrointestinal oncology · 2023Article
- Advances of Long Non-Coding RNAs as Potential Biomarkers for Tuberculosis: New Hope for Diagnosis?Pharmaceutics · 2023Review
- Long noncoding RNA HIKER regulates erythropoiesis in Monge's disease via CSNK2B.The Journal of clinical investigation · 2023Article
1 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
16 authors at 3 institutions in 1 country.
Qiong ZhangDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Ti-Chun ChaoDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Veena S PatilDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Yue QinDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Shashi Kant TiwariDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Joshua ChiouDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.ORCID 0000-0002-4618-0647
Alexander DobinCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Chih-Ming TsaiDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Zhonghan LiDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Jason DangDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Shagun GuptaDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Kevin UrdahlCenter for Infectious Disease Research (CIDR), Seattle, WA, USA.
Victor NizetDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.ORCID 0000-0003-3847-0422
Thomas R GingerasCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Kyle J GaultonDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
Tariq M RanaDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA trana@ucsd.edu.ORCID 0000-0001-9558-5766
University of California San Diego · USCold Spring Harbor Laboratory · USCenter for Infectious Disease Research · US
Funding
Virology CoreP01CA177322 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CHANDA, SUMIT K · 2014 to 2018
$8.7MModeling HIV/AIDS Associated Neurological Disorders with Human Pluripotent CellsDP1DA039562 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RANA, TARIQ M · 2015 to 2020
$3.9MIdentification and Regulation of RNA Modification by HIV infection and MethamphetamineR01DA046171 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RANA, TARIQ M · 2018 to 2022
$3.1MRegulation of HIV-1 Replication by Cellular IncRNAsR21AI125103 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RANA, TARIQ M · 2016 to 2017
$426kNCI NIH HHS P01 CA177322NIAID NIH HHS R21 AI125103NIDA NIH HHS DP1 DA039562NIDA NIH HHS R01 DA046171
Abstract
Long noncoding RNAs (lncRNAs) can regulate target gene expression by acting in
Indexed as
Gene Expression RegulationCells, CulturedCytokinesDNA-(Apurinic or Apyrimidinic Site) LyaseGenome, HumanHistone Deacetylase 1HumansImmunity, InnateInflammationMacrophagesMyristoylated Alanine-Rich C Kinase SubstratePromoter Regions, GeneticRNA, Long NoncodingStreptococcal InfectionsStreptococcus agalactiaeToll-Like ReceptorsAPEX1 protein, humanCytokinesDNA-(Apurinic or Apyrimidinic Site) LyaseHDAC1 protein, humanHistone Deacetylase 1MARCKS protein, humanMyristoylated Alanine-Rich C Kinase SubstrateRNA, Long NoncodingToll-Like Receptorscytokine productionhost–pathogen interactionsinnate immune systemlncRNATLRs
Identifiers
What OpenQuestion holds
Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.