Evidence map›Paper›PMID 30916329›Full record

ArticleNucleic acids research2019

Transcriptional and post-transcriptional events trigger de novo infB expression in cold stressed Escherichia coli.

Anna Brandi, Mara Giangrossi, Silvia Paoloni, Roberto Spurio, Anna M Giuliodori, Cynthia L Pon, Claudio O Gualerzi

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Foods (Basel, Switzerland) · 2025
    Article
  4. Review
  5. Cold stress enhances cryotolerance inCurrent research in microbial sciences · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. TheMicroorganisms · 2020
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anna BrandiLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Mara GiangrossiLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Silvia PaoloniLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Roberto SpurioLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Anna M GiuliodoriLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Cynthia L PonLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Claudio O GualerziLaboratory of Genetics, Department of Biosciences and Biotechnology University of Camerino, 62032 Camerino (MC), Italy.
Università di Camerino · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

After a 37 to 10°C temperature downshift the level of translation initiation factor IF2, like that of IF1 and IF3, increases at least 3-fold with respect to the ribosomes. To clarify the mechanisms and conditions leading to cold-stress induction of infB expression, the consequences of this temperature shift on infB (IF2) transcription, infB mRNA stability and translation were analysed. The Escherichia coli gene encoding IF2 is part of the metY-nusA-infB operon that contains three known promoters (P-1, P0 and P2) in addition to two promoters P3 and P4 identified in this study, the latter committed to the synthesis of a monocistronic mRNA encoding exclusively IF2. The results obtained indicate that the increased level of IF2 following cold stress depends on three mechanisms: (i) activation of all the promoters of the operon, P-1 being the most cold-responsive, as a likely consequence of the reduction of the ppGpp level that follows cold stress; (ii) a large increase in infB mRNA half-life and (iii) the cold-shock induced translational bias that ensures efficient translation of infB mRNA by the translational apparatus of cold shocked cells. A comparison of the mechanisms responsible for the cold shock induction of the three initiation factors is also presented.

Indexed as

Transcription, GeneticCold-Shock ResponseCold TemperatureEscherichia coliGene Expression Regulation, BacterialProkaryotic Initiation Factor-2Promoter Regions, GeneticProtein BiosynthesisProtein Processing, Post-TranslationalRibosomesRNA, MessengerRNA StabilityProkaryotic Initiation Factor-2RNA, Messenger

Identifiers

PMID30916329
PMCPMC6511841
OpenAlexW2925292661

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.