Evidence map›Paper›PMID 30916323›Full record

ArticleNucleic acids research2019

Translation initiation factor IF2 contributes to ribosome assembly and maturation during cold adaptation.

Anna Brandi, Lolita Piersimoni, Naser Aliye Feto, Roberto Spurio, Jean-Hervé Alix, Frank Schmidt, Claudio O Gualerzi

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Adaptive Evolution ofMicroorganisms · 2025
    Article
  8. Article
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  11. Dynamic Transcriptional Landscape ofInternational journal of molecular sciences · 2023
    Article
  12. Article
  13. Article
  14. Mitoribosomal small subunit maturation involves formation of initiation-like complexes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Article
  16. Regulated strategies of cold-adapted microorganisms in response to cold: a review.Environmental science and pollution research international · 2021
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Anna BrandiLaboratory of Genetics, University of Camerino, 62032 Camerino (MC), Italy.
Lolita PiersimoniLaboratory of Genetics, University of Camerino, 62032 Camerino (MC), Italy.
Naser Aliye FetoLaboratory of Genetics, University of Camerino, 62032 Camerino (MC), Italy.
Roberto SpurioLaboratory of Genetics, University of Camerino, 62032 Camerino (MC), Italy.
Jean-Hervé AlixLaboratory of Genetics, University of Camerino, 62032 Camerino (MC), Italy.
Frank SchmidtInterfaculty Institute for Genetics and Functional Genomics, University Medicine Greifswald, Felix-Hausdorff-Str. 8, 17475 Greifswald, Germany.
Claudio O GualerziLaboratory of Genetics, University of Camerino, 62032 Camerino (MC), Italy.
Università di Camerino · ITUniversitätsmedizin Greifswald · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cold-stress in Escherichia coli induces de novo synthesis of translation initiation factors IF1, IF2 and IF3 while ribosome synthesis and assembly slow down. Consequently, the IFs/ribosome stoichiometric ratio increases about 3-fold during the first hours of cold adaptation. The IF1 and IF3 increase plays a role in translation regulation at low temperature (cold-shock-induced translational bias) but so far no specific role could be attributed to the extra copies of IF2. In this work, we show that the extra-copies of IF2 made after cold stress are associated with immature ribosomal subunits together with at least another nine proteins involved in assembly and/or maturation of ribosomal subunits. This finding, coupled with evidence that IF2 is endowed with GTPase-associated chaperone activity that promotes refolding of denatured GFP, and the finding that two cold-sensitive IF2 mutations cause the accumulation of immature ribosomal particles, indicate that IF2 is yet another GTPase protein that participates in ribosome assembly/maturation, especially at low temperatures. Overall, these findings are instrumental in redefining the functional role of IF2, which cannot be regarded as being restricted to its well documented functions in translation initiation of bacterial mRNA.

Indexed as

Peptide Chain Initiation, TranslationalAdaptation, PhysiologicalCold-Shock ResponseCold TemperatureEscherichia coliProkaryotic Initiation Factor-2Protein BiosynthesisRibosomesRibosome SubunitsRNA, MessengerProkaryotic Initiation Factor-2RNA, Messenger

Identifiers

PMID30916323
PMCPMC6511846
OpenAlexW2924755631

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.