Evidence map›Paper›PMID 30915882›Full record

ArticleEpigenetics2019

Novel DNA methylation sites associated with cigarette smoking among African Americans.

Veronica Barcelona, Yunfeng Huang, Kristen Brown, Jiaxuan Liu, Wei Zhao, Miao Yu, Sharon L R Kardia, Jennifer A Smith, Jacquelyn Y Taylor, Yan V Sun

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 3 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 3 syntheses or guidelines pooled it, 50 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Review
  6. Article
  7. DNA Methylation Patterns Associated with Tinnitus in Young Adults-A Pilot Study.Journal of the Association for Research in Otolaryngology : JARO · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Epigenetic biomarkers for smoking cessation.Addiction neuroscience · 2023
    Article
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  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Veronica Barcelonaa Yale School of Nursing , Orange , CT , USA.ORCID 0000-0003-3070-1716
Yunfeng Huangb Department of Epidemiology , Emory University Rollins School of Public Health , Atlanta , Georgia.
Kristen Brownb Department of Epidemiology , Emory University Rollins School of Public Health , Atlanta , Georgia.ORCID 0000-0002-9955-0568
Jiaxuan Liuc School of Public Health , University of Michigan, Department of Epidemiology , Ann Arbor , MI , USA.ORCID 0000-0002-8955-5832
Wei Zhaoc School of Public Health , University of Michigan, Department of Epidemiology , Ann Arbor , MI , USA.ORCID 0000-0001-7388-0692
Miao Yuc School of Public Health , University of Michigan, Department of Epidemiology , Ann Arbor , MI , USA.
Sharon L R Kardiac School of Public Health , University of Michigan, Department of Epidemiology , Ann Arbor , MI , USA.
Jennifer A Smithc School of Public Health , University of Michigan, Department of Epidemiology , Ann Arbor , MI , USA.ORCID 0000-0002-3575-5468
Jacquelyn Y Taylord New York University Rory Meyers College of Nursing , New York , NY , USA.
Yan V Sunb Department of Epidemiology , Emory University Rollins School of Public Health , Atlanta , Georgia.ORCID 0000-0002-2838-1824
University of Michigan · USEmory University · USNew York University · USYale University · US

Funding

Multidisciplinary Research Training to Reduce Inequities in Cardiovascular HealthT32HL130025 · NHLBI · EMORY UNIVERSITY · PI Tené T Lewis, Viola Vaccarino · 2016 to 2026
$6.4M
Genomic Predictors of Arteriosclerosis in HypertensivesR01HL087660 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2007 to 2009
$5.1M
Intergenerational Impact of Genetic and Psychological Factors on Blood PressureR01NR013520 · NINR · YALE UNIVERSITY · PI TAYLOR, JACQUELYN Y · 2014 to 2019
$3.9M
A Social Epigenomic Approach to Health Disparities in Cardiovascular Risk FactorsR01HL141292 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SMITH, JENNIFER ANN · 2018 to 2021
$2.9M
GENETIC DETERMINANTS OF HIGH BP IN THREE RACIAL GROUPSU01HL054457 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2000 to 2004
$2.8M
Epigenetics of Arteriosclerosis in African American Hypertensive SibshipsR01HL133221 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SMITH, JENNIFER ANN · 2016 to 2019
$2.2M
Genetic Mechanisms of Arteriosclerosis in Hypertensive SibshipsR01HL119443 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2014 to 2017
$2.1M
Epigenetic Biomarkers of Common Chronic DiseasesRC1HL100185 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2009 to 2010
$999k
DNA Methylation, Preterm Birth and Blood Pressure in African American ChildrenK01NR017010 · NINR · YALE UNIVERSITY · PI BARCELONA, VERONICA · 2017 to 2019
$278k
GENETIC DETERMINANTS OF HIGH BP IN THREE RACIAL GROUPSU10HL054457 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SING, CHARLES F · 1995 to 1999
–
NHLBI NIH HHS R01 HL087660NHLBI NIH HHS R01 HL119443NHLBI NIH HHS R01 HL133221NHLBI NIH HHS R01 HL141292NHLBI NIH HHS RC1 HL100185NHLBI NIH HHS T32 HL130025NHLBI NIH HHS U01 HL054457NHLBI NIH HHS U10 HL054457NINR NIH HHS K01 NR017010NINR NIH HHS R01 NR013520
6 · The paper itself

Abstract

introductionCigarette smoking has been associated with adverse health outcomes for mothers and children and is a major contributor to heart disease. Although cigarette smoking is known to affect the epigenome, few studies have been done in African American populations. In this study, we investigated the association between cigarette smoking and DNA methylation (DNAm) among African Americans from the Intergenerational Impact of Genetic and Psychological Factors on Blood Pressure Study (InterGEN), and the Genetic Epidemiology Network of Arteriopathy (GENOA).

methodsThe InterGEN study aims to examine the effects of genetic and psychological factors on blood pressure among African American women and their children. Current cigarette smoking was assessed at baseline. DNAm of saliva was assessed using the 850K EPIC Illumina BeadChip for Epigenome-Wide Association analyses. A replication study was conducted among 1100 participants in the GENOA study using the same BeadChip.

resultsAfter controlling for age, body mass index, population structure and cell composition, 26 epigenome-wide significant sites (FDR q < 0.05) were identified, including the AHRR and PHF14 genes associated with atherosclerosis and lung disease, respectively. Six novel CpG sites were discovered in the InterGEN sample and replicated in the GENOA sample. Genes mapped include RARA, FSIP1, ALPP, PIK3R5, KIAA0087, and MGAT3, which were largely associated with cancer development.

conclusionWe observed significant epigenetic associations between smoking and disease-associated genes (e.g., cardiovascular disease, lung cancer). Six novel CpG sites were identified and replicated across saliva and blood samples.

Indexed as

DNA MethylationGenetic LociAdultBlack or African AmericanCardiovascular DiseasesChildChild, PreschoolCigarette SmokingEpigenesis, GeneticFemaleGenetic Predisposition to DiseaseHumansLung NeoplasmsMaleAfrican AmericansDNA methylationepigenomicsobesitysmokingwomen

Identifiers

PMID30915882
PMCPMC6557550
OpenAlexW2922683548

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.