ArticlePlant biotechnology journal2019
Tea Plant Information Archive: a comprehensive genomics and bioinformatics platform for tea plant.
Article in Plant biotechnology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 126 papers.
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126 citing papers in PubMed.
- Comparative Genomics of the TeaInternational journal of molecular sciences · 2026Article
- Mining ofHorticulture research · 2026Article
- DIMORPH: an integrated multi-omics resource for camptothecin-producing plants.Molecular horticulture · 2026Article
- Evolution of the TCP gene family and pan-genome analysis in tea (Camellia sinensis).BMC plant biology · 2026Article
- Integrative analysis of endogenous phytohormones and transcriptomics reveals mechanism of light-induced callus formation in tea (Camellia sinensis) cuttings.BMC plant biology · 2026Article
- Identification and Analysis of the Terpene Synthases (TPS) Gene Family in Camellia Based on Pan-Genome.Genes · 2026Article
- Evolutionary and pan-genomic analysis of theFrontiers in plant science · 2026Article
- Systematic mining and characterization of metal transporter families regulating zinc homeostasis provide insights into metal homeostasis inFrontiers in plant science · 2026Article
- Pangenome-wide identification and analysis of the heat shock transcription factor gene family in tea plant (Frontiers in plant science · 2026Article
- Integrated Transcriptomic and Metabolomic Analyses Shed Light on the Regulation of Aromatic Amino Acid Biosynthesis in a Novel Albino Tea (Current issues in molecular biology · 2025Article
- CsMYB213-CsbHLH35 module regulates theanine biosynthesis in tea plants (Camellia sinensis L.).Plant biotechnology journal · 2025Article
- CsPRMT5-mediated histone H4R3 dimethylation negatively regulates resistance to gray blight in tea plants (Horticulture research · 2025Article
- Domain characteristics, classification and expression profiles in response to various abiotic stresses of four HD-Zip subfamilies in tea plant.BMC plant biology · 2025Article
- Genome-Wide Analysis of Tea FK506-Binding Proteins (FKBPs) Reveals ThatInternational journal of molecular sciences · 2025Article
- UGT74B5-mediated glucosylation atHorticulture research · 2025Article
- Aluminum-activated malate transporter family member CsALMT6 mediates fluoride resistance in tea plants (Horticulture research · 2025Article
- Genomic Analysis of the Caleosin Family in Theaceae Reveals Lineagespecific Evolutionary Patterns.Current protein & peptide science · 2025Article
- Article
- Integrated Transcriptomic and Metabolomic Analyses Reveal Changes in Aroma- and Taste-Related Substances During the Withering Process of Black Tea.Foods (Basel, Switzerland) · 2024Article
- The light-harvesting chlorophyll a/b-binding proteins of photosystem II family members are responsible for temperature sensitivity and leaf color phenotype in albino tea plant.Journal of advanced research · 2024Article
66 more citing papers are in PubMed but not listed here.
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Authors and funding
12 authors.
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Abstract
Tea is the world's widely consumed nonalcohol beverage with essential economic and health benefits. Confronted with the increasing large-scale omics-data set particularly the genome sequence released in tea plant, the construction of a comprehensive knowledgebase is urgently needed to facilitate the utilization of these data sets towards molecular breeding. We hereby present the first integrative and specially designed web-accessible database, Tea Plant Information Archive (TPIA; http://tpia.teaplant.org). The current release of TPIA employs the comprehensively annotated tea plant genome as framework and incorporates with abundant well-organized transcriptomes, gene expressions (across species, tissues and stresses), orthologs and characteristic metabolites determining tea quality. It also hosts massive transcription factors, polymorphic simple sequence repeats, single nucleotide polymorphisms, correlations, manually curated functional genes and globally collected germplasm information. A variety of versatile analytic tools (e.g. JBrowse, blast, enrichment analysis, etc.) are established helping users to perform further comparative, evolutionary and functional analysis. We show a case application of TPIA that provides novel and interesting insights into the phytochemical content variation of section Thea of genus Camellia under a well-resolved phylogenetic framework. The constructed knowledgebase of tea plant will serve as a central gateway for global tea community to better understand the tea plant biology that largely benefits the whole tea industry.
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