Evidence map›Paper›PMID 30908543›Full record

ArticlePloS one2019

DNA elements for constitutive androstane receptor- and pregnane X receptor-mediated regulation of bovine CYP3A28 gene.

Mery Giantin, Jenni Küblbeck, Vanessa Zancanella, Viktoria Prantner, Fabiana Sansonetti, Axel Schoeniger, Roberta Tolosi, Giorgia Guerra, Silvia Da Ros, Mauro Dacasto and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Mery GiantinDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.ORCID 0000-0003-0015-3800
Jenni KüblbeckFaculty of Health Sciences, School of Pharmacy, University of Eastern Finland, Kuopio, Finland.ORCID 0000-0002-6439-4403
Vanessa ZancanellaDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Viktoria PrantnerFaculty of Health Sciences, School of Pharmacy, University of Eastern Finland, Kuopio, Finland.
Fabiana SansonettiDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Axel SchoenigerInstitute of Biochemistry, University of Leipzig, Leipzig, Germany.
Roberta TolosiDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Giorgia GuerraDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Silvia Da RosDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Mauro DacastoDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Paavo HonkakoskiFaculty of Health Sciences, School of Pharmacy, University of Eastern Finland, Kuopio, Finland.
University of Padua · ITUniversity of Eastern Finland · FILeipzig University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The regulation of cytochrome P450 3A (CYP3A) enzymes is established in humans, but molecular mechanisms of its basal and xenobiotic-mediated regulation in cattle are still unknown. Here, ~10 kbp of the bovine CYP3A28 gene promoter were cloned and sequenced, and putative transcription factor binding sites were predicted. The CYP3A28 proximal promoter (PP; -284/+71 bp) contained DNA elements conserved among species. Co-transfection of bovine nuclear receptors (NRs) pregnane X and constitutive androstane receptor (bPXR and bCAR) with various CYP3A28 promoter constructs into hepatoma cell lines identified two main regions, the PP and the distal fragment F3 (-6899/-4937 bp), that were responsive to bPXR (both) and bCAR (F3 fragment only). Site-directed mutagenesis and deletion of NR motif ER6, hepatocyte nuclear factor 1 (HNF-1) and HNF-4 binding sites in the PP suggested either the involvement of ER6 element in bPXR-mediated activation or the cooperation between bPXR and liver-enriched transcription factors (LETFs) in PP transactivation. A putative DR5 element within the F3 fragment was involved in bCAR-mediated PP+F3 transactivation. Although DNA enrichment by anti-human NR antibodies was quite low, ChIP investigations in control and RU486-treated BFH12 cells, suggested that retinoid X receptor α (RXRα) bound to ER6 and DR5 motifs and its recruitment was enhanced by RU486 treatment. The DR5 element seemed to be recognized mainly by bCAR, while no clear-cut results were obtained for bPXR. Present results point to species-differences in CYP3A regulation and the complexity of bovine CYP3A28 regulatory elements, but further confirmatory studies are needed.

Indexed as

AnimalsBinding SitesCattleCell Line, TumorCloning, MolecularConstitutive Androstane ReceptorCytochrome P-450 CYP3AGene Expression RegulationHep G2 CellsHumansPregnane X ReceptorPromoter Regions, GeneticReceptors, Cytoplasmic and NuclearSequence Analysis, DNATranscription FactorsTransfectionConstitutive Androstane ReceptorCytochrome P-450 CYP3APregnane X ReceptorReceptors, Cytoplasmic and NuclearTranscription Factors

Identifiers

PMID30908543
PMCPMC6433341
OpenAlexW3023213270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.