Evidence map›Paper›PMID 30907728›Full record

ArticleeLife2019

The RNA helicase UPF1 associates with mRNAs co-transcriptionally and is required for the release of mRNAs from gene loci.

Anand K Singh, Subhendu Roy Choudhury, Sandip De, Jie Zhang, Stephen Kissane, Vibha Dwivedi, Preethi Ramanathan, Marija Petric, Luisa Orsini, Daniel Hebenstreit and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 64 citations in OpenAlex.

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  15. A hybrid RNA FISH immunofluorescence protocol onbioRxiv : the preprint server for biology · 2023
    Article
  16. NCell death and differentiation · 2023
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Anand K SinghSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.ORCID 0000-0001-6500-6727
Subhendu Roy ChoudhurySchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Sandip DeSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Jie ZhangLife Sciences, University of Warwick, Coventry, United Kingdom.
Stephen KissaneSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Vibha DwivediSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Preethi RamanathanSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Marija PetricSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Luisa OrsiniSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.
Daniel HebenstreitLife Sciences, University of Warwick, Coventry, United Kingdom.ORCID 0000-0003-0144-6728
Saverio BrognaSchool of Biosciences, University of Birmingham, Birmingham, United Kingdom.ORCID 0000-0001-7063-4381
University of Birmingham · GBUniversity of Warwick · GBNational Institutes of Health · US

Funding

Biotechnology and Biological Sciences Research Council BB/L006340/1Biotechnology and Biological Sciences Research Council BB/M017982/1Biotechnology and Biological Sciences Research Council BB/M022757/1Wellcome Trust
6 · The paper itself

Abstract

UPF1 is an RNA helicase that is required for nonsense-mediated mRNA decay (NMD) in eukaryotes, and the predominant view is that UPF1 mainly operates on the 3'UTRs of mRNAs that are directed for NMD in the cytoplasm. Here we offer evidence, obtained from

Indexed as

Transcription, GeneticAnimalsDrosophilaDrosophila ProteinsRNA HelicasesRNA, MessengerDrosophila ProteinsRNA HelicasesRNA, MessengerUpf1 protein, DrosophilachromosomesD. melanogastergene expressionmRNA exportNMDpolytene chromosomesRNA helicasessplicingTranscription

Identifiers

PMID30907728
PMCPMC6447362
OpenAlexW2923350365

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.